Difference between revisions of "CYSS"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLUDC GLUDC] == * direction: ** LEFT-TO-RIGHT * common name: ** Glutamate Decarboxylase * Synonym(s...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CYSS CYSS] == * direction: ** LEFT-TO-RIGHT * common name: ** Cysteine synthase * Synonym(s): == R...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLUDC GLUDC] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/CYSS CYSS] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Glutamate Decarboxylase
+
** Cysteine synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[glu__L]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[co2]][c] '''+''' 1.0 [[4abut]][c]
+
** 1.0 [[h2s]][c] '''+''' 1.0 [[acser]][c] '''=>''' 1.0 [[ac]][c] '''+''' 1.0 [[cys__L]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 L-Glutamate[c] '''+''' 1.0 H+[c] '''=>''' 1.0 CO2 CO2[c] '''+''' 1.0 4-Aminobutanoate[c]
+
** 1.0 Hydrogen sulfide[c] '''+''' 1.0 O-Acetyl-L-serine[c] '''=>''' 1.0 Acetate[c] '''+''' 1.0 L-Cysteine[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[EF0289]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
* Gene: [[EF1584]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
** '''179''' reactions found over '''1054''' reactions in the full pathway
 
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00920]]: [http://www.genome.jp/dbget-bin/www_bget?map00920 map00920]
 +
** '''5''' reactions found over '''56''' reactions in the full pathway
 
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
** '''104''' reactions found over '''715''' reactions in the full pathway
 
** '''104''' reactions found over '''715''' reactions in the full pathway
−
* [[map00430]]: [http://www.genome.jp/dbget-bin/www_bget?map00430 map00430]
+
* [[map00270]]: [http://www.genome.jp/dbget-bin/www_bget?map00270 map00270]
−
** '''5''' reactions found over '''24''' reactions in the full pathway
+
** '''25''' reactions found over '''135''' reactions in the full pathway
−
* [[map00650]]: [http://www.genome.jp/dbget-bin/www_bget?map00650 map00650]
+
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
−
** '''14''' reactions found over '''156''' reactions in the full pathway
+
** '''45''' reactions found over '''220''' reactions in the full pathway
−
* [[map00250]]: [http://www.genome.jp/dbget-bin/www_bget?map00250 map00250]
+
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
−
** '''22''' reactions found over '''93''' reactions in the full pathway
+
** '''56''' reactions found over '''228''' reactions in the full pathway
−
* [[map00410]]: [http://www.genome.jp/dbget-bin/www_bget?map00410 map00410]
+
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
−
** '''8''' reactions found over '''91''' reactions in the full pathway
+
** '''135''' reactions found over '''694''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[gap-filling]]:
+
* Category: [[orthology]]
−
** [[meneco]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[added for gapfilling]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17785 17785]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14829 14829]
−
* EC Number : 4.1.1.15
+
* BioCyc : META:ACSERLY-RXN
−
* MetaNetX (MNX) Equation : MNXR95942
+
* MetaNetX (MNX) Equation : MNXR97007
−
* KEGG Reaction : R00261
+
* KEGG Reaction : R00897
−
* BioCyc : META:GLUTDECARBOX-RXN
+
* EC Number : 2.5.1.47
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Glutamate Decarboxylase}}
+
{{#set: common name=Cysteine synthase}}
−
{{#set: in pathway=map01100|map01110|map01120|map00430|map00650|map00250|map00410}}
+
{{#set: gene associated=EF0289|EF1584}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: in pathway=map01100|map01110|map00920|map01120|map00270|map01200|map01230|map01130}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-l_plantarum_wcfs1}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:23, 21 March 2018

Reaction CYSS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Cysteine synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Hydrogen sulfide[c] + 1.0 O-Acetyl-L-serine[c] => 1.0 Acetate[c] + 1.0 L-Cysteine[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:ACSERLY-RXN
  • MetaNetX (MNX) Equation : MNXR97007
  • KEGG Reaction : R00897
  • EC Number : 2.5.1.47




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