Difference between revisions of "CYSTS 2"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GCALDD GCALDD] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycolaldehyde dehydrogenase * Sy...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CYSTS_2 CYSTS_2] == * direction: ** LEFT-TO-RIGHT * common name: ** Cystathionine b synthase * Syno...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/GCALDD GCALDD] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/CYSTS_2 CYSTS_2] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Glycolaldehyde dehydrogenase
+
** Cystathionine b synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[nad]][c] '''+''' 1.0 [[gcald]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[nadh]][c] '''+''' 2.0 [[h]][c] '''+''' 1.0 [[glyclt]][c]
+
** 1.0 [[ser__L]][c] '''+''' 1.0 [[hcys__L]][c] '''=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[cysth__L]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 Glycolaldehyde[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 2.0 H+[c] '''+''' 1.0 Glycolate C2H3O3[c]
+
** 1.0 L-Serine[c] '''+''' 1.0 L-Homocysteine[c] '''=>''' 1.0 H2O H2O[c] '''+''' 1.0 L Cystathionine C7H14N2O4S[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF0253]]
+
* Gene: [[EF0289]]
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
 
** '''25''' reactions found over '''129''' reactions in the full pathway
 
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
** '''111''' reactions found over '''715''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
*** [[b_subtilis_subsp_subtilis_str168]]
+
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-curation_from_orthology]]
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20001 20001]
 
* BioCyc : META:GLYCOLALD-DEHYDROG-RXN
 
* MetaNetX (MNX) Equation : MNXR100060
 
* KEGG Reaction : R01333
 
* EC Number : 1.2.1.21
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Glycolaldehyde dehydrogenase}}
+
{{#set: common name=Cystathionine b synthase}}
{{#set: gene associated=EF0253}}
+
{{#set: gene associated=EF0289}}
{{#set: in pathway=map00630|map01120}}
+
{{#set: in pathway=}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=orthology|manual}}
 +
{{#set: reconstruction source=manual-curation_from_orthology|orthology-b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
 

Latest revision as of 16:33, 21 March 2018

Reaction CYSTS_2

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Cystathionine b synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Serine[c] + 1.0 L-Homocysteine[c] => 1.0 H2O H2O[c] + 1.0 L Cystathionine C7H14N2O4S[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links