Difference between revisions of "DAAOP"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PNTK PNTK] == * direction: ** LEFT-TO-RIGHT * common name: ** Pantothenate kinase * Synonym(s): ==...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DAAOP DAAOP] == * direction: ** LEFT-TO-RIGHT * common name: ** D alanyl aminopeptidase * Synonym(s...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/PNTK PNTK] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/DAAOP DAAOP] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Pantothenate kinase
+
** D alanyl aminopeptidase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[pnto__R]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[4ppan]][c]
+
** 1.0 [[alaala]][e] '''+''' 1.0 [[h2o]][e] '''=>''' 2.0 [[ala__D]][e]
 
* With common name(s):
 
* With common name(s):
** 1.0 (R)-Pantothenate[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c] '''+''' 1.0 D-4'-Phosphopantothenate[c]
+
** 1.0 D-Alanyl-D-alanine[e] '''+''' 1.0 H2O H2O[e] '''=>''' 2.0 D-Alanine[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF0168]]
+
* Gene: [[EF2723]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
* [[map00770]]: [http://www.genome.jp/dbget-bin/www_bget?map00770 map00770]
 
** '''17''' reactions found over '''75''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
*** Tool: [[pantograph]]
 
** Source: [[orthology-l_plantarum_wcfs1]]
 
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* EC Number : 2.7.1.33
 
* BioCyc : META:PANTOTHENATE-KIN-RXN
 
* MetaNetX (MNX) Equation : MNXR103050
 
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16373 16373]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20661 20661]
* Reactome : REACT_R-BTA-196857
+
* BioCyc : META:3.4.13.22-RXN
* KEGG Reaction : R03018
+
* MetaNetX (MNX) Equation : MNXR95675
 +
* KEGG Reaction : R07651
 +
* EC Number : 3.4.13.22
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Pantothenate kinase}}
+
{{#set: common name=D alanyl aminopeptidase}}
{{#set: gene associated=EF0168}}
+
{{#set: gene associated=EF2723}}
{{#set: in pathway=map01100|map00770}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
+
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:41, 21 March 2018

Reaction DAAOP

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • D alanyl aminopeptidase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 D-Alanyl-D-alanine[e] + 1.0 H2O H2O[e] => 2.0 D-Alanine[e]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:3.4.13.22-RXN
  • MetaNetX (MNX) Equation : MNXR95675
  • KEGG Reaction : R07651
  • EC Number : 3.4.13.22