Difference between revisions of "DADK"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TDP TDP] == * direction: ** LEFT-TO-RIGHT * common name: ** Thiamin pyrophosphatase * Synonym(s):...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DADK DADK] == * direction: ** REVERSIBLE * common name: ** Deoxyadenylate kinase * Synonym(s): ==...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/TDP TDP] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/DADK DADK] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Thiamin pyrophosphatase
+
** Deoxyadenylate kinase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h2o]][c] '''+''' 1.0 [[thmpp]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[thmmp]][c] '''+''' 1.0 [[pi]][c]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[damp]][c] '''<=>''' 1.0 [[adp]][c] '''+''' 1.0 [[dadp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H2O H2O[c] '''+''' 1.0 Thiamine diphosphate[c] '''=>''' 1.0 H+[c] '''+''' 1.0 Thiamin monophosphate[c] '''+''' 1.0 Phosphate[c]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 DAMP C10H12N5O6P[c] '''<=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 DADP C10H12N5O9P2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1595]]
+
* Gene: [[EF0228]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''135''' reactions found over '''694''' reactions in the full pathway
 
* [[map00730]]: [http://www.genome.jp/dbget-bin/www_bget?map00730 map00730]
 
* [[map00730]]: [http://www.genome.jp/dbget-bin/www_bget?map00730 map00730]
 
** '''11''' reactions found over '''24''' reactions in the full pathway
 
** '''11''' reactions found over '''24''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
** '''97''' reactions found over '''298''' reactions in the full pathway
 
** '''97''' reactions found over '''298''' reactions in the full pathway
Line 27: Line 32:
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* EC Number : 2.7.4.11
 +
* BioCyc : META:DEOXYADENYLATE-KINASE-RXN
 +
* MetaNetX (MNX) Equation : MNXR96117
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27998 27998]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23100 23100]
−
* BioCyc : META:RXN0-3542
+
* Reactome : REACT_R-BTA-110141
−
* MetaNetX (MNX) Equation : MNXR104756
+
* KEGG Reaction : R01547
−
* KEGG Reaction : R00615
+
{{#set: direction=REVERSIBLE}}
−
* EC Number : 3.6.1
+
{{#set: common name=Deoxyadenylate kinase}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: gene associated=EF0228}}
−
{{#set: common name=Thiamin pyrophosphatase}}
+
{{#set: in pathway=map01100|map01130|map00730|map01110|map00230}}
−
{{#set: gene associated=EF1595}}
+
−
{{#set: in pathway=map01100|map00730|map00230}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
+
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:40, 21 March 2018

Reaction DADK

  • direction:
    • REVERSIBLE
  • common name:
    • Deoxyadenylate kinase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 DAMP C10H12N5O6P[c] <=> 1.0 ADP C10H12N5O10P2[c] + 1.0 DADP C10H12N5O9P2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 2.7.4.11
  • BioCyc : META:DEOXYADENYLATE-KINASE-RXN
  • MetaNetX (MNX) Equation : MNXR96117
  • RHEA:
  • Reactome : REACT_R-BTA-110141
  • KEGG Reaction : R01547




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