Difference between revisions of "DARTAL"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TransportSeed_pnto__R TransportSeed_pnto__R] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Rea...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ACPS1 ACPS1] == * direction: ** LEFT-TO-RIGHT * common name: ** Acyl-carrier protein synthase * Syn...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/TransportSeed_pnto__R TransportSeed_pnto__R] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ACPS1 ACPS1] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** Acyl-carrier protein synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[pnto__R]][e] '''=>''' 1.0 [[pnto__R]][c]
+
** 1.0 [[apoACP]][c] '''+''' 1.0 [[coa]][c] '''=>''' 1.0 [[pap]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[ACP]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 (R)-Pantothenate[e] '''=>''' 1.0 (R)-Pantothenate[c]
+
** 1.0 Apoprotein [acyl carrier protein][c] '''+''' 1.0 Coenzyme A[c] '''=>''' 1.0 Adenosine 3',5'-bisphosphate[c] '''+''' 1.0 H+[c] '''+''' 1.0 Acyl carrier protein[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[EF0848]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 +
* [[EF3111]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map00770]]: [http://www.genome.jp/dbget-bin/www_bget?map00770 map00770]
 +
** '''17''' reactions found over '''75''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
+
* Category: [[orthology]]
** [[added to manage seeds from extracellular to cytosol compartment]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* MetaNetX (MNX) Equation : MNXR95403
 +
* EC Number : 2.7.8.7
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: in pathway=}}
+
{{#set: common name=Acyl-carrier protein synthase}}
{{#set: reconstruction category=manual}}
+
{{#set: gene associated=EF0848|EF3111}}
{{#set: reconstruction source=added to manage seeds from extracellular to cytosol compartment}}
+
{{#set: in pathway=map00770}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 19:32, 18 March 2018

Reaction ACPS1

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Acyl-carrier protein synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Apoprotein [acyl carrier protein][c] + 1.0 Coenzyme A[c] => 1.0 Adenosine 3',5'-bisphosphate[c] + 1.0 H+[c] + 1.0 Acyl carrier protein[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR95403
  • EC Number : 2.7.8.7