Difference between revisions of "DDPA"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_leu__L ExchangeSeed_leu__L] == * direction: ** REVERSIBLE * Synonym(s): == Reaction F...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DDPA DDPA] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-deoxy-D-arabino-heptulosonate 7-pho...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_leu__L ExchangeSeed_leu__L] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/DDPA DDPA] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** 3-deoxy-D-arabino-heptulosonate 7-phosphate synthetase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[leu__L]][C-BOUNDARY] '''<=>''' 1.0 [[leu__L]][e]
+
** 1.0 [[pep]][c] '''+''' 1.0 [[e4p]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[2dda7p]][c] '''+''' 1.0 [[pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 L-Leucine[C-BOUNDARY] '''<=>''' 1.0 L-Leucine[e]
+
** 1.0 Phosphoenolpyruvate[c] '''+''' 1.0 D-Erythrose 4-phosphate[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 2-Dehydro-3-deoxy-D-arabino-heptonate 7-phosphate[c] '''+''' 1.0 Phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[EF1562]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''135''' reactions found over '''694''' reactions in the full pathway
 +
* [[map00400]]: [http://www.genome.jp/dbget-bin/www_bget?map00400 map00400]
 +
** '''13''' reactions found over '''59''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''56''' reactions found over '''228''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[manual]]:
+
* Category: [[orthology]]
−
** [[added to manage seeds from boundary to extracellular compartment]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* RHEA:
−
{{#set: in pathway=}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14717 14717]
−
{{#set: reconstruction category=manual}}
+
* BioCyc : META:DAHPSYN-RXN
−
{{#set: reconstruction source=added to manage seeds from boundary to extracellular compartment}}
+
* MetaNetX (MNX) Equation : MNXR97218
 +
* KEGG Reaction : R01826
 +
* EC Number : 2.5.1.54
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=3-deoxy-D-arabino-heptulosonate 7-phosphate synthetase}}
 +
{{#set: gene associated=EF1562}}
 +
{{#set: in pathway=map01100|map01130|map00400|map01110|map01230}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:13, 21 March 2018

Reaction DDPA

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-deoxy-D-arabino-heptulosonate 7-phosphate synthetase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Phosphoenolpyruvate[c] + 1.0 D-Erythrose 4-phosphate[c] + 1.0 H2O H2O[c] => 1.0 2-Dehydro-3-deoxy-D-arabino-heptonate 7-phosphate[c] + 1.0 Phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:DAHPSYN-RXN
  • MetaNetX (MNX) Equation : MNXR97218
  • KEGG Reaction : R01826
  • EC Number : 2.5.1.54




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