Difference between revisions of "DKII"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/THPAT THPAT] == * direction: ** LEFT-TO-RIGHT * common name: ** L-2,3,4,5-tetrahydrodipicolinate N2...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DKII DKII] == * direction: ** LEFT-TO-RIGHT * common name: ** 2 dehydro 3 deoxy D gluconate 5 dehyd...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/THPAT THPAT] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/DKII DKII] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** L-2,3,4,5-tetrahydrodipicolinate N2-acetyltransferase
+
** 2 dehydro 3 deoxy D gluconate 5 dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[thdp]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[accoa]][c] '''=>''' 1.0 [[nal2a6o]][c] '''+''' 1.0 [[coa]][c]
+
** 1.0 [[h]][c] '''+''' 1.0 [[nadh]][c] '''+''' 1.0 [[46dh25dohxn]][c] '''=>''' 1.0 [[nad]][c] '''+''' 1.0 [[2ddglcn]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 2,3,4,5-Tetrahydrodipicolinate[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 Acetyl-CoA[c] '''=>''' 1.0 N-Acetyl-L-2-amino-6-oxopimelate[c] '''+''' 1.0 Coenzyme A[c]
+
** 1.0 H+[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 4S  4 6 Dihydroxy 2 5 dioxohexanoate C6H7O6[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 2-Dehydro-3-deoxy-D-gluconate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1133]]
+
* Gene: [[EF2263]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* Gene: [[EF0426]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''179''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map00300]]: [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300]
 
−
** '''13''' reactions found over '''34''' reactions in the full pathway
 
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 
−
** '''56''' reactions found over '''228''' reactions in the full pathway
 
−
* [[map00261]]: [http://www.genome.jp/dbget-bin/www_bget?map00261 map00261]
 
−
** '''3''' reactions found over '''8''' reactions in the full pathway
 
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''135''' reactions found over '''694''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-l_plantarum_wcfs1]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* MetaNetX (MNX) Equation : MNXR97493
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13085 13085]
+
−
* BioCyc : META:2.3.1.89-RXN
+
−
* MetaNetX (MNX) Equation : MNXR95864
+
−
* KEGG Reaction : R04364
+
−
* EC Number : 2.3.1.-
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=L-2,3,4,5-tetrahydrodipicolinate N2-acetyltransferase}}
+
{{#set: common name=2 dehydro 3 deoxy D gluconate 5 dehydrogenase}}
−
{{#set: gene associated=EF1133}}
+
{{#set: gene associated=EF2263|EF0426}}
−
{{#set: in pathway=map01100|map01110|map00300|map01230|map00261|map01130}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=orthology-l_plantarum_wcfs1}}
+
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:34, 21 March 2018

Reaction DKII

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2 dehydro 3 deoxy D gluconate 5 dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H+[c] + 1.0 Nicotinamide adenine dinucleotide - reduced[c] + 1.0 4S 4 6 Dihydroxy 2 5 dioxohexanoate C6H7O6[c] => 1.0 Nicotinamide adenine dinucleotide[c] + 1.0 2-Dehydro-3-deoxy-D-gluconate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR97493




Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=DKII&oldid=10671"