Difference between revisions of "ExchangeSeed ile L"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PUNP2 PUNP2] == * direction: ** REVERSIBLE * common name: ** Purine-nucleoside phosphorylase (Deoxy...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_ile__L ExchangeSeed_ile__L] == * direction: ** REVERSIBLE * Synonym(s): == Reaction F...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/PUNP2 PUNP2] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_ile__L ExchangeSeed_ile__L] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
−
* common name:
 
−
** Purine-nucleoside phosphorylase (Deoxyadenosine)
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[dad_2]][c] '''+''' 1.0 [[pi]][c] '''<=>''' 1.0 [[2dr1p]][c] '''+''' 1.0 [[ade]][c]
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** 1.0 [[ile__L]][C-BOUNDARY] '''<=>''' 1.0 [[ile__L]][e]
 
* With common name(s):
 
* With common name(s):
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** 1.0 Deoxyadenosine[c] '''+''' 1.0 Phosphate[c] '''<=>''' 1.0 2-Deoxy-D-ribose 1-phosphate[c] '''+''' 1.0 Adenine[c]
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** 1.0 L-Isoleucine[C-BOUNDARY] '''<=>''' 1.0 L-Isoleucine[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[EF0186]]
 
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
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* [[EF0187]]
 
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** [[pantograph]]-[[l_plantarum_wcfs1]]
 
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
 
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* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
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** '''83''' reactions found over '''244''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''218''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
−
** '''98''' reactions found over '''298''' reactions in the full pathway
 
−
* [[map00760]]: [http://www.genome.jp/dbget-bin/www_bget?map00760 map00760]
 
−
** '''25''' reactions found over '''97''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
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* Category: [[manual]]
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** [[pantograph]]:
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** Source: [[manual-import_from_medium]]
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*** [[e_coli_sstr_k12_substr_mg1655]]
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*** Comment: [[added to manage seeds from boundary to extracellular compartment]]
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*** [[l_plantarum_wcfs1]]
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−
*** [[b_subtilis_subsp_subtilis_str168]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27742 27742]
 
−
* BioCyc : META:DEOXYADENPHOSPHOR-RXN
 
−
* MetaNetX (MNX) Equation : MNXR103344
 
−
* KEGG Reaction : R02557
 
−
* EC Number : 2.4.2.1
 
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=Purine-nucleoside phosphorylase (Deoxyadenosine)}}
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{{#set: in pathway=}}
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{{#set: gene associated=EF0186|EF0187}}
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{{#set: reconstruction category=manual}}
−
{{#set: in pathway=map01100|map00240|map01110|map00230|map00760}}
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{{#set: reconstruction source=manual-import_from_medium}}
−
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
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{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+

Latest revision as of 16:39, 21 March 2018

Reaction ExchangeSeed_ile__L

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Isoleucine[C-BOUNDARY] <=> 1.0 L-Isoleucine[e]

Genes associated with this reaction

Pathways

Reconstruction information

External links

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