Difference between revisions of "ExchangeSeed lpam"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK4 NDPK4] == * direction: ** REVERSIBLE * common name: ** Nucleoside-diphosphate kinase (ATP:dTD...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_lpam ExchangeSeed_lpam] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formu...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK4 NDPK4] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_lpam ExchangeSeed_lpam] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
* common name:
 
** Nucleoside-diphosphate kinase (ATP:dTDP)
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[dtdp]][c] '''+''' 1.0 [[atp]][c] '''<=>''' 1.0 [[dttp]][c] '''+''' 1.0 [[adp]][c]
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** 1.0 [[lpam]][C-BOUNDARY] '''<=>''' 1.0 [[lpam]][e]
 
* With common name(s):
 
* With common name(s):
** 1.0 DTDP C10H13N2O11P2[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''<=>''' 1.0 DTTP C10H13N2O14P3[c] '''+''' 1.0 ADP C10H12N5O10P2[c]
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** 1.0 Lipoamide C8H15NOS2[C-BOUNDARY] '''<=>''' 1.0 Lipoamide C8H15NOS2[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[EF1036]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
* [[EF0228]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''508''' reactions found over '''2349''' reactions in the full pathway
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
** '''156''' reactions found over '''694''' reactions in the full pathway
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
** '''218''' reactions found over '''1054''' reactions in the full pathway
 
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
** '''83''' reactions found over '''244''' reactions in the full pathway
 
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
** '''98''' reactions found over '''298''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
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* Category: [[manual]]
** [[pantograph]]:
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** Source: [[manual-import_from_medium]]
*** [[e_coli_sstr_k12_substr_mg1655]]
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*** Comment: [[added to manage seeds from boundary to extracellular compartment]]
*** [[l_plantarum_wcfs1]]
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*** [[b_subtilis_subsp_subtilis_str168]]
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== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27682 27682]
 
* BioCyc : META:DTDPKIN-RXN
 
* MetaNetX (MNX) Equation : MNXR101937
 
* KEGG Reaction : R02093
 
* EC Number : 2.7.4.6
 
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
{{#set: common name=Nucleoside-diphosphate kinase (ATP:dTDP)}}
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{{#set: in pathway=}}
{{#set: gene associated=EF1036|EF0228}}
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{{#set: reconstruction category=manual}}
{{#set: in pathway=map01100|map01130|map01110|map00240|map00230}}
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{{#set: reconstruction source=manual-import_from_medium}}
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
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Latest revision as of 16:42, 21 March 2018

Reaction ExchangeSeed_lpam

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Lipoamide C8H15NOS2[C-BOUNDARY] <=> 1.0 Lipoamide C8H15NOS2[e]

Genes associated with this reaction

Pathways

Reconstruction information

External links