Difference between revisions of "ExchangeSeed val L"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PRPPS PRPPS] == * direction: ** REVERSIBLE * common name: ** Phosphoribosylpyrophosphate synthetase...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_val__L ExchangeSeed_val__L] == * direction: ** REVERSIBLE * Synonym(s): == Reaction F...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/PRPPS PRPPS] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_val__L ExchangeSeed_val__L] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
−
* common name:
 
−
** Phosphoribosylpyrophosphate synthetase
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[atp]][c] '''+''' 1.0 [[r5p]][c] '''<=>''' 1.0 [[amp]][c] '''+''' 1.0 [[prpp]][c] '''+''' 1.0 [[h]][c]
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** 1.0 [[val__L]][C-BOUNDARY] '''<=>''' 1.0 [[val__L]][e]
 
* With common name(s):
 
* With common name(s):
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** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Alpha-D-Ribose 5-phosphate[c] '''<=>''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 5-Phospho-alpha-D-ribose 1-diphosphate[c] '''+''' 1.0 H+[c]
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** 1.0 L-Valine[C-BOUNDARY] '''<=>''' 1.0 L-Valine[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[EF3163]]
 
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
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* [[EF2073]]
 
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
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** '''460''' reactions found over '''2349''' reactions in the full pathway
 
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
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** '''179''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
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** '''97''' reactions found over '''298''' reactions in the full pathway
 
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
−
** '''104''' reactions found over '''715''' reactions in the full pathway
 
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''135''' reactions found over '''694''' reactions in the full pathway
 
−
* [[map00030]]: [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030]
 
−
** '''26''' reactions found over '''69''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[manual]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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** Source: [[manual-import_from_medium]]
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*** Tool: [[pantograph]]
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*** Comment: [[added to manage seeds from boundary to extracellular compartment]]
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** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
+
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-l_plantarum_wcfs1]]
+
−
*** Tool: [[pantograph]]
+
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR103215
 
−
* EC Number : 2.7.6.1
 
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
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{{#set: common name=Phosphoribosylpyrophosphate synthetase}}
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{{#set: in pathway=}}
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{{#set: gene associated=EF3163|EF2073}}
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{{#set: reconstruction category=manual}}
−
{{#set: in pathway=map01100|map01110|map00230|map01120|map01130|map00030}}
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{{#set: reconstruction source=manual-import_from_medium}}
−
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
−
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 16:35, 21 March 2018

Reaction ExchangeSeed_val__L

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Valine[C-BOUNDARY] <=> 1.0 L-Valine[e]

Genes associated with this reaction

Pathways

Reconstruction information

External links

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