Difference between revisions of "Paps"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00350 map00350] == * common_name: ** Tyrosine metabolism * Synonym(s): == Reaction(s) found == * '...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/FMETTRS FMETTRS] == * direction: ** LEFT-TO-RIGHT * common name: ** Methionyl-tRNA formyltransferas...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00350 map00350] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/FMETTRS FMETTRS] ==
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* common_name:
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* direction:
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** Tyrosine metabolism
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** LEFT-TO-RIGHT
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* common name:
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** Methionyl-tRNA formyltransferase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''10''' reaction(s) found
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* With identifiers:
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** [[TYRCBOX]]
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** 1.0 [[mettrna]][c] '''+''' 1.0 [[10fthf]][c] '''=>''' 1.0 [[thf]][c] '''+''' 1.0 [[fmettrna]][c] '''+''' 1.0 [[h]][c]
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** [[HSTPT]]
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* With common name(s):
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** [[SSALx]]
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** 1.0 L-Methionyl-tRNA (Met)[c] '''+''' 1.0 10-Formyltetrahydrofolate[c] '''=>''' 1.0 5,6,7,8-Tetrahydrofolate[c] '''+''' 1.0 N-Formylmethionyl-tRNA[c] '''+''' 1.0 H+[c]
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** [[SSALy]]
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** [[ALDD2y]]
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== Genes associated with this reaction  ==
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** [[ALDD2x]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[ASPTA]]
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* [[EF3123]]
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** [[ASPO1]]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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** [[BZDH]]
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== Pathways  ==
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** [[PHETA1]]
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* [[map00670]]: [http://www.genome.jp/dbget-bin/www_bget?map00670 map00670]
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== Reaction(s) not found ==
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** '''14''' reactions found over '''65''' reactions in the full pathway
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* '''92''' reaction(s) not found
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* [[map00970]]: [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970]
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** [http://bigg.ucsd.edu/universal/reactions/MAOLNOR MAOLNOR]
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** '''23''' reactions found over '''49''' reactions in the full pathway
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** [http://bigg.ucsd.edu/universal/reactions/ARAT ARAT]
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== Reconstruction information  ==
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** [http://bigg.ucsd.edu/universal/reactions/CMCMSAD CMCMSAD]
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* [[orthology]]:
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** [http://bigg.ucsd.edu/universal/reactions/HGNTOR HGNTOR]
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** [[pantograph]]:
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** [http://bigg.ucsd.edu/universal/reactions/3HXKYNOXDA 3HXKYNOXDA]
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*** [[e_coli_sstr_k12_substr_mg1655]]
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** [http://bigg.ucsd.edu/universal/reactions/MACACI MACACI]
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** [http://bigg.ucsd.edu/universal/reactions/DHEDAA DHEDAA]
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** [http://bigg.ucsd.edu/universal/reactions/4HALDD 4HALDD]
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** [http://bigg.ucsd.edu/universal/reactions/5HOXINOXDA 5HOXINOXDA]
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** [http://bigg.ucsd.edu/universal/reactions/ALCD22xi ALCD22xi]
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** [http://bigg.ucsd.edu/universal/reactions/3SALATAi 3SALATAi]
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** [http://bigg.ucsd.edu/universal/reactions/DCT DCT]
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** [http://bigg.ucsd.edu/universal/reactions/TYRDOPO TYRDOPO]
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** [http://bigg.ucsd.edu/universal/reactions/5HXKYNDCL 5HXKYNDCL]
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** [http://bigg.ucsd.edu/universal/reactions/4MBZALDH 4MBZALDH]
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** [http://bigg.ucsd.edu/universal/reactions/NORANMT NORANMT]
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** [http://bigg.ucsd.edu/universal/reactions/3HLYTCL 3HLYTCL]
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** [http://bigg.ucsd.edu/universal/reactions/ALCD25xi ALCD25xi]
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** [http://bigg.ucsd.edu/universal/reactions/41R2A1H12BOOX 41R2A1H12BOOX]
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** [http://bigg.ucsd.edu/universal/reactions/DOPAQNISO1 DOPAQNISO1]
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** [http://bigg.ucsd.edu/universal/reactions/CITALALDOR CITALALDOR]
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** [http://bigg.ucsd.edu/universal/reactions/HPA3MO HPA3MO]
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** [http://bigg.ucsd.edu/universal/reactions/IDHPOXOX2b IDHPOXOX2b]
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** [http://bigg.ucsd.edu/universal/reactions/THYPX THYPX]
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** [http://bigg.ucsd.edu/universal/reactions/3MOXTYROX 3MOXTYROX]
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** [http://bigg.ucsd.edu/universal/reactions/4HOXPACMOF 4HOXPACMOF]
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** [http://bigg.ucsd.edu/universal/reactions/HDC HDC]
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** [http://bigg.ucsd.edu/universal/reactions/PPOR PPOR]
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** [http://bigg.ucsd.edu/universal/reactions/FUMAC FUMAC]
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** [http://bigg.ucsd.edu/universal/reactions/IDHPOXOXb IDHPOXOXb]
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** [http://bigg.ucsd.edu/universal/reactions/OMAIS OMAIS]
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** [http://bigg.ucsd.edu/universal/reactions/HISDC HISDC]
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** [http://bigg.ucsd.edu/universal/reactions/ALCD23xim ALCD23xim]
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** [http://bigg.ucsd.edu/universal/reactions/PHACCOAGLNAC PHACCOAGLNAC]
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** [http://bigg.ucsd.edu/universal/reactions/CHOLD CHOLD]
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** [http://bigg.ucsd.edu/universal/reactions/IDHPOXOX4 IDHPOXOX4]
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** [http://bigg.ucsd.edu/universal/reactions/IDHPOXOX3 IDHPOXOX3]
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** [http://bigg.ucsd.edu/universal/reactions/TYRDOPO3 TYRDOPO3]
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** [http://bigg.ucsd.edu/universal/reactions/34DHPLACOX_NADP 34DHPLACOX_NADP]
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** [http://bigg.ucsd.edu/universal/reactions/BZALDH BZALDH]
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** [http://bigg.ucsd.edu/universal/reactions/3MBZALDH 3MBZALDH]
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** [http://bigg.ucsd.edu/universal/reactions/SALMCOM2 SALMCOM2]
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** [http://bigg.ucsd.edu/universal/reactions/ASPOm ASPOm]
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** [http://bigg.ucsd.edu/universal/reactions/4H2KPILY 4H2KPILY]
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** [http://bigg.ucsd.edu/universal/reactions/3MOX4HOXPGALDOX_NADP 3MOX4HOXPGALDOX_NADP]
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** [http://bigg.ucsd.edu/universal/reactions/AATGm AATGm]
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** [http://bigg.ucsd.edu/universal/reactions/LCYSTAT LCYSTAT]
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** [http://bigg.ucsd.edu/universal/reactions/5HXKYNOXDA 5HXKYNOXDA]
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** [http://bigg.ucsd.edu/universal/reactions/ALDD2ym ALDD2ym]
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** [http://bigg.ucsd.edu/universal/reactions/CMHMI CMHMI]
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** [http://bigg.ucsd.edu/universal/reactions/PHETA1m PHETA1m]
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** [http://bigg.ucsd.edu/universal/reactions/ALCD22xim ALCD22xim]
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** [http://bigg.ucsd.edu/universal/reactions/DOPAMT DOPAMT]
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** [http://bigg.ucsd.edu/universal/reactions/34DHXMANDACOX 34DHXMANDACOX]
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** [http://bigg.ucsd.edu/universal/reactions/3M4HDXPAC 3M4HDXPAC]
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** [http://bigg.ucsd.edu/universal/reactions/3MOX4HOXPGALDOX 3MOX4HOXPGALDOX]
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** [http://bigg.ucsd.edu/universal/reactions/PACCOAL2 PACCOAL2]
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** [http://bigg.ucsd.edu/universal/reactions/DOPABMO DOPABMO]
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** [http://bigg.ucsd.edu/universal/reactions/POATh POATh]
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** [http://bigg.ucsd.edu/universal/reactions/DHPDO DHPDO]
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** [http://bigg.ucsd.edu/universal/reactions/34DHOXPEGOX 34DHOXPEGOX]
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** [http://bigg.ucsd.edu/universal/reactions/APRTO2 APRTO2]
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** [http://bigg.ucsd.edu/universal/reactions/ALDD20y ALDD20y]
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** [http://bigg.ucsd.edu/universal/reactions/SSALxm SSALxm]
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** [http://bigg.ucsd.edu/universal/reactions/AOOAh AOOAh]
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** [http://bigg.ucsd.edu/universal/reactions/ALDD19x_P ALDD19x_P]
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** [http://bigg.ucsd.edu/universal/reactions/AATC AATC]
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** [http://bigg.ucsd.edu/universal/reactions/4HOXPACDOX_NADP 4HOXPACDOX_NADP]
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** [http://bigg.ucsd.edu/universal/reactions/AATG AATG]
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** [http://bigg.ucsd.edu/universal/reactions/ALCD23xi ALCD23xi]
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** [http://bigg.ucsd.edu/universal/reactions/DMCITALOR DMCITALOR]
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** [http://bigg.ucsd.edu/universal/reactions/ASPTAp ASPTAp]
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** [http://bigg.ucsd.edu/universal/reactions/MAAIn MAAIn]
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** [http://bigg.ucsd.edu/universal/reactions/ALCD25xim ALCD25xim]
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** [http://bigg.ucsd.edu/universal/reactions/34DHPHAMT 34DHPHAMT]
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** [http://bigg.ucsd.edu/universal/reactions/ALDD20ym ALDD20ym]
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** [http://bigg.ucsd.edu/universal/reactions/5HLTDL 5HLTDL]
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** [http://bigg.ucsd.edu/universal/reactions/LTDCL LTDCL]
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** [http://bigg.ucsd.edu/universal/reactions/ALDD19xr ALDD19xr]
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** [http://bigg.ucsd.edu/universal/reactions/ASPTAm ASPTAm]
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** [http://bigg.ucsd.edu/universal/reactions/5HOXINDACTO2OX 5HOXINDACTO2OX]
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** [http://bigg.ucsd.edu/universal/reactions/SALMCOM SALMCOM]
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** [http://bigg.ucsd.edu/universal/reactions/ASPATh ASPATh]
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** [http://bigg.ucsd.edu/universal/reactions/41R1H2MAE12BOOX 41R1H2MAE12BOOX]
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** [http://bigg.ucsd.edu/universal/reactions/3SALATAim 3SALATAim]
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** [http://bigg.ucsd.edu/universal/reactions/ALDD2xm ALDD2xm]
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** [http://bigg.ucsd.edu/universal/reactions/DDMCITALOR DDMCITALOR]
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** [http://bigg.ucsd.edu/universal/reactions/ALDD22x ALDD22x]
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** [http://bigg.ucsd.edu/universal/reactions/LCYSTATm LCYSTATm]
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−
** [http://bigg.ucsd.edu/universal/reactions/34DHXMANDACOX_NADP 34DHXMANDACOX_NADP]
+
−
** [http://bigg.ucsd.edu/universal/reactions/SSNOh SSNOh]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3HPAOX 3HPAOX]
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== External links  ==
 
== External links  ==
−
{{#set: common_name=Tyrosine metabolism}}
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* MetaNetX (MNX) Equation : MNXR99604
−
{{#set: reaction found=10}}
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* KEGG Reaction : R03940
−
{{#set: reaction not found=92}}
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* EC Number : 2.1.2.9
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Methionyl-tRNA formyltransferase}}
 +
{{#set: gene associated=EF3123}}
 +
{{#set: in pathway=map00670|map00970}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}

Revision as of 16:38, 10 January 2018

Reaction FMETTRS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Methionyl-tRNA formyltransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Methionyl-tRNA (Met)[c] + 1.0 10-Formyltetrahydrofolate[c] => 1.0 5,6,7,8-Tetrahydrofolate[c] + 1.0 N-Formylmethionyl-tRNA[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR99604
  • KEGG Reaction : R03940
  • EC Number : 2.1.2.9




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