Difference between revisions of "GCALDD"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/ptrc ptrc] == * common name: ** Putrescine * Synonym(s): == Reaction(s) known to consume the...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GCALDD GCALDD] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycolaldehyde dehydrogenase * Sy...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
[[Category:Metabolite]]
+
[[Category:Reaction]]
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/ptrc ptrc] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GCALDD GCALDD] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Putrescine
+
** Glycolaldehyde dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
* [[PTRCabc]]
+
* With identifiers:
* [[CSPMDDH]]
+
** 1.0 [[h2o]][c] '''+''' 1.0 [[nad]][c] '''+''' 1.0 [[gcald]][c] '''=>''' 1.0 [[nadh]][c] '''+''' 2.0 [[h]][c] '''+''' 1.0 [[glyclt]][c]
* [[PTRCTA]]
+
* With common name(s):
* [[PTRCOX1]]
+
** 1.0 H2O H2O[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 Glycolaldehyde[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 2.0 H+[c] '''+''' 1.0 Glycolate C2H3O3[c]
* [[SPMS]]
+
 
== Reaction(s) known to produce the compound ==
+
== Genes associated with this reaction  ==
* [[PTRCabc]]
+
Genes have been associated with this reaction based on different elements listed below.
* [[ORNDC]]
+
* Gene: [[EF0253]]
== Reaction(s) of unknown directionality ==
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
== Pathways  ==
 +
* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
 +
** '''21''' reactions found over '''129''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''104''' reactions found over '''715''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: common name=Putrescine}}
+
* RHEA:
{{#set: consumed by=PTRCabc|CSPMDDH|PTRCTA|PTRCOX1|SPMS}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20001 20001]
{{#set: produced by=PTRCabc|ORNDC}}
+
* BioCyc : META:GLYCOLALD-DEHYDROG-RXN
 +
* MetaNetX (MNX) Equation : MNXR100060
 +
* KEGG Reaction : R01333
 +
* EC Number : 1.2.1.21
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Glycolaldehyde dehydrogenase}}
 +
{{#set: gene associated=EF0253}}
 +
{{#set: in pathway=map00630|map01120}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:33, 21 March 2018

Reaction GCALDD

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glycolaldehyde dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O H2O[c] + 1.0 Nicotinamide adenine dinucleotide[c] + 1.0 Glycolaldehyde[c] => 1.0 Nicotinamide adenine dinucleotide - reduced[c] + 2.0 H+[c] + 1.0 Glycolate C2H3O3[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:GLYCOLALD-DEHYDROG-RXN
  • MetaNetX (MNX) Equation : MNXR100060
  • KEGG Reaction : R01333
  • EC Number : 1.2.1.21