Difference between revisions of "GLYCTO1"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/KAS14 KAS14] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta-ketoacyl-ACP synthase * Synony...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLYCTO1 GLYCTO1] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycolate oxidase * Synonym(s):...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/KAS14 KAS14] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLYCTO1 GLYCTO1] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Beta-ketoacyl-ACP synthase
+
** Glycolate oxidase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h]][c] '''+''' 1.0 [[malACP]][c] '''+''' 1.0 [[acACP]][c] '''=>''' 1.0 [[actACP]][c] '''+''' 1.0 [[ACP]][c] '''+''' 1.0 [[co2]][c]
+
** 1.0 [[glyclt]][c] '''+''' 1.0 [[o2]][c] '''=>''' 1.0 [[glx]][c] '''+''' 1.0 [[h2o2]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H+[c] '''+''' 1.0 Malonyl-[acyl-carrier protein][c] '''+''' 1.0 Acetyl-ACP[c] '''=>''' 1.0 Acetoacetyl-ACP[c] '''+''' 1.0 Acyl carrier protein[c] '''+''' 1.0 CO2 CO2[c]
+
** 1.0 Glycolate C2H3O3[c] '''+''' 1.0 O2 O2[c] '''=>''' 1.0 Glyoxylate[c] '''+''' 1.0 Hydrogen peroxide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[EF2880]]
 
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
−
* [[EF0283]]
 
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map01212]]: [http://www.genome.jp/dbget-bin/www_bget?map01212 map01212]
+
* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
−
** '''36''' reactions found over '''182''' reactions in the full pathway
+
** '''21''' reactions found over '''129''' reactions in the full pathway
−
* [[map00061]]: [http://www.genome.jp/dbget-bin/www_bget?map00061 map00061]
+
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
−
** '''65''' reactions found over '''160''' reactions in the full pathway
+
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''104''' reactions found over '''715''' reactions in the full pathway
 +
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 +
** '''45''' reactions found over '''220''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''135''' reactions found over '''694''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[gap-filling]]
−
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
−
* BioCyc : META:3-OXOACYL-ACP-SYNTH-BASE-RXN
+
* EC Number : 1.1.3.15
−
* MetaNetX (MNX) Equation : MNXR100912
+
* BioCyc : META:RXN-969
−
* KEGG Reaction : R04355
+
* MetaNetX (MNX) Equation : MNXR100338
−
* EC Number : 2.3.1.-
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25311 25311]
 +
* Reactome : REACT_R-ATH-389842
 +
* KEGG Reaction : R00475
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Beta-ketoacyl-ACP synthase}}
+
{{#set: common name=Glycolate oxidase}}
−
{{#set: gene associated=EF2880|EF0283}}
+
{{#set: in pathway=map01100|map00630|map01110|map01120|map01200|map01130}}
−
{{#set: in pathway=map01100|map01212|map00061}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction comment=added for gapfilling}}

Latest revision as of 16:32, 21 March 2018

Reaction GLYCTO1

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glycolate oxidase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Glycolate C2H3O3[c] + 1.0 O2 O2[c] => 1.0 Glyoxylate[c] + 1.0 Hydrogen peroxide[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • EC Number : 1.1.3.15
  • BioCyc : META:RXN-969
  • MetaNetX (MNX) Equation : MNXR100338
  • RHEA:
  • Reactome : REACT_R-ATH-389842
  • KEGG Reaction : R00475




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