Difference between revisions of "GLYDHDA"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NADH4 NADH4] == * direction: ** LEFT-TO-RIGHT * common name: ** NADH dehydrogenase Menaquinone 7...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLYDHDA GLYDHDA] == * direction: ** REVERSIBLE * common name: ** Gylcine dehydrogenase (deamidating...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/NADH4 NADH4] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLYDHDA GLYDHDA] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
** NADH dehydrogenase Menaquinone 7  no proton
+
** Gylcine dehydrogenase (deamidating)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[mqn7]][c] '''+''' 1.0 [[nadh]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[mql7]][c] '''+''' 1.0 [[nad]][c]
+
** 1.0 [[gly]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[nad]][c] '''<=>''' 1.0 [[nh4]][c] '''+''' 1.0 [[glx]][c] '''+''' 1.0 [[nadh]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Menaquinone 7 C46H64O2[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 H+[c] '''=>''' 1.0 Menaquinol 7 C46H66O2[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c]
+
** 1.0 Glycine[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''<=>''' 1.0 Ammonium[c] '''+''' 1.0 Glyoxylate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[EF3257]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
* [[EF2055]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[orthology]]
+
* Category: [[gap-filling]]
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
*** Tool: [[pantograph]]
+
*** Tool: [[meneco]]
** Source: [[orthology-l_plantarum_wcfs1]]
+
**** Comment: [[added for gapfilling]]
*** Tool: [[pantograph]]
+
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: direction=REVERSIBLE}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=35559 35559]
+
{{#set: common name=Gylcine dehydrogenase (deamidating)}}
* MetaNetX (MNX) Equation : MNXR101871
+
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=NADH dehydrogenase Menaquinone 7  no proton }}
+
{{#set: gene associated=EF3257|EF2055}}
+
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=gap-filling}}
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=meneco}}
 +
{{#set: reconstruction comment=added for gapfilling}}

Latest revision as of 16:28, 21 March 2018

Reaction GLYDHDA

  • direction:
    • REVERSIBLE
  • common name:
    • Gylcine dehydrogenase (deamidating)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Glycine[c] + 1.0 H2O H2O[c] + 1.0 Nicotinamide adenine dinucleotide[c] <=> 1.0 Ammonium[c] + 1.0 Glyoxylate[c] + 1.0 Nicotinamide adenine dinucleotide - reduced[c] + 1.0 H+[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links