Difference between revisions of "GLYO1"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SPMDAT1 SPMDAT1] == * direction: ** LEFT-TO-RIGHT * common name: ** Spermidine acetyltransferase *...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLYO1 GLYO1] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycine oxidase * Synonym(s): == R...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/SPMDAT1 SPMDAT1] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLYO1 GLYO1] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Spermidine acetyltransferase
+
** Glycine oxidase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[spmd]][c] '''+''' 1.0 [[accoa]][c] '''=>''' 1.0 [[coa]][c] '''+''' 1.0 [[N1aspmd]][c] '''+''' 1.0 [[h]][c]
+
** 1.0 [[gly]][c] '''+''' 1.0 [[o2]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[glx]][c] '''+''' 1.0 [[nh4]][c] '''+''' 1.0 [[h2o2]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Spermidine[c] '''+''' 1.0 Acetyl-CoA[c] '''=>''' 1.0 Coenzyme A[c] '''+''' 1.0 N1-Acetylspermidine[c] '''+''' 1.0 H+[c]
+
** 1.0 Glycine[c] '''+''' 1.0 O2 O2[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Glyoxylate[c] '''+''' 1.0 Ammonium[c] '''+''' 1.0 Hydrogen peroxide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[EF1086]]
 
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
−
* [[EF0678]]
 
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map00330]]: [http://www.genome.jp/dbget-bin/www_bget?map00330 map00330]
 
−
** '''22''' reactions found over '''149''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[gap-filling]]
−
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[meneco]]
−
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
+
**** Comment: [[added for gapfilling]]
−
*** Tool: [[pantograph]]
+
 
== External links  ==
 
== External links  ==
 +
* EC Number : 1.4.3.19
 +
* BioCyc : META:1.4.3.19-RXN
 +
* MetaNetX (MNX) Equation : MNXR100352
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28150 28150]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11532 11532]
−
* Reactome : REACT_R-BTA-351208
+
* Reactome : REACT_R-BTA-389821
−
* MetaNetX (MNX) Equation : MNXR104491
+
* KEGG Reaction : R00366
−
* EC Number : 2.3.1.57
+
−
* BioCyc : META:SPERMACTRAN-RXN
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Spermidine acetyltransferase}}
+
{{#set: common name=Glycine oxidase}}
−
{{#set: gene associated=EF1086|EF0678}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=map01100|map00330}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction comment=added for gapfilling}}

Latest revision as of 16:41, 21 March 2018

Reaction GLYO1

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glycine oxidase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Glycine[c] + 1.0 O2 O2[c] + 1.0 H2O H2O[c] => 1.0 Glyoxylate[c] + 1.0 Ammonium[c] + 1.0 Hydrogen peroxide[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • EC Number : 1.4.3.19
  • BioCyc : META:1.4.3.19-RXN
  • MetaNetX (MNX) Equation : MNXR100352
  • RHEA:
  • Reactome : REACT_R-BTA-389821
  • KEGG Reaction : R00366




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