Difference between revisions of "GPDDA3"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TRPTA TRPTA] == * direction: ** REVERSIBLE * common name: ** Tryptophan transaminase * Synonym(s):...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GPDDA3 GPDDA3] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycerophosphodiester phosphodies...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/GPDDA3 GPDDA3] == |
* direction: | * direction: | ||
| − | ** | + | ** LEFT-TO-RIGHT |
* common name: | * common name: | ||
| − | ** | + | ** Glycerophosphodiester phosphodiesterase (Glycerophosphoserine) |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[g3ps]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[ser__L]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[glyc3p]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 Glycerophosphoserine[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 L-Serine[c] '''+''' 1.0 H+[c] '''+''' 1.0 Glycerol 3-phosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[EF2163]] |
| − | ** [[ | + | ** Source: [[orthology-l_plantarum_wcfs1]] |
| + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] | ||
| + | * Gene: [[EF0779]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
== Pathways == | == Pathways == | ||
| − | * [[ | + | * [[map00564]]: [http://www.genome.jp/dbget-bin/www_bget?map00564 map00564] |
| − | ** ''' | + | ** '''19''' reactions found over '''134''' reactions in the full pathway |
| − | + | ||
| − | + | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]]: | + | * Category: [[orthology]] |
| − | ** [[pantograph]]: | + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29875 29875] |
| − | + | * MetaNetX (MNX) Equation : MNXR100412 | |
| − | * MetaNetX (MNX) Equation : | + | * EC Number : 3.1.4.46 |
| − | + | * BioCyc : META:RXN-14136 | |
| − | * EC Number : | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: direction= | + | {{#set: common name=Glycerophosphodiester phosphodiesterase (Glycerophosphoserine)}} |
| − | {{#set: common name= | + | {{#set: gene associated=EF2163|EF0779}} |
| − | {{#set: gene associated= | + | {{#set: in pathway=map00564}} |
| − | {{#set: in pathway= | + | |
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-l_plantarum_wcfs1}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
| − | |||
Latest revision as of 16:35, 21 March 2018
Contents
Reaction GPDDA3
- direction:
- LEFT-TO-RIGHT
- common name:
- Glycerophosphodiester phosphodiesterase (Glycerophosphoserine)
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 Glycerophosphoserine[c] + 1.0 H2O H2O[c] => 1.0 L-Serine[c] + 1.0 H+[c] + 1.0 Glycerol 3-phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: EF2163
- Source: orthology-l_plantarum_wcfs1
- Source: orthology-e_coli_sstr_k12_substr_mg1655
- Gene: EF0779
- Source: orthology-l_plantarum_wcfs1
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-e_coli_sstr_k12_substr_mg1655
- Tool: pantograph
- Source: orthology-l_plantarum_wcfs1
- Tool: pantograph
- Source: orthology-e_coli_sstr_k12_substr_mg1655
External links
- RHEA:
- MetaNetX (MNX) Equation : MNXR100412
- EC Number : 3.1.4.46
- BioCyc : META:RXN-14136
