Difference between revisions of "Kt3r"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CSND CSND] == * direction: ** LEFT-TO-RIGHT * common name: ** Cytosine deaminase * Synonym(s): ==...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/Kt3r Kt3r] == * direction: ** REVERSIBLE * common name: ** Potassium transport out via proton antip...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/CSND CSND] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/Kt3r Kt3r] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
** Cytosine deaminase
+
** Potassium transport out via proton antiport
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h]][c] '''+''' 1.0 [[csn]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[nh4]][c] '''+''' 1.0 [[ura]][c]
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** 1.0 [[k]][c] '''+''' 1.0 [[h]][e] '''<=>''' 1.0 [[h]][c] '''+''' 1.0 [[k]][e]
 
* With common name(s):
 
* With common name(s):
** 1.0 H+[c] '''+''' 1.0 Cytosine[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Ammonium[c] '''+''' 1.0 Uracil[c]
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** 1.0 Potassium[c] '''+''' 1.0 H+[e] '''<=>''' 1.0 H+[c] '''+''' 1.0 Potassium[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF2206]]
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* Gene: [[EF0296]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
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** Source: [[manual-2_reaction_to_add_delete]]
* [[EF0390]]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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== Pathways  ==
 
== Pathways  ==
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
** '''82''' reactions found over '''244''' reactions in the full pathway
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
* [[map00330]]: [http://www.genome.jp/dbget-bin/www_bget?map00330 map00330]
 
** '''22''' reactions found over '''149''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
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* Category: [[manual]]
** [[pantograph]]:
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** Source: [[manual-2_reaction_to_add_delete]]
*** [[e_coli_sstr_k12_substr_mg1655]]
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*** Comment: [[this was a reaction occurring in the perisplasm of e. coli]]
*** [[l_plantarum_wcfs1]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20605 20605]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29467 29467]
* BioCyc : META:CYTDEAM-RXN
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* MetaNetX (MNX) Equation : MNXR100939
* MetaNetX (MNX) Equation : MNXR96927
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* BioCyc : META:TRANS-RXN-42
* KEGG Reaction : R00974
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{{#set: direction=REVERSIBLE}}
* EC Number : 3.5.4.1
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{{#set: common name=Potassium transport out via proton antiport}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: gene associated=EF0296}}
{{#set: common name=Cytosine deaminase}}
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{{#set: in pathway=}}
{{#set: gene associated=EF2206|EF0390}}
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{{#set: reconstruction category=manual}}
{{#set: in pathway=map00240|map01100|map00330}}
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{{#set: reconstruction source=manual-2_reaction_to_add_delete}}
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction comment=this was a reaction occurring in the perisplasm of e. coli}}
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}
+

Latest revision as of 16:29, 21 March 2018

Reaction Kt3r

  • direction:
    • REVERSIBLE
  • common name:
    • Potassium transport out via proton antiport
  • Synonym(s):

Reaction Formula

  • With identifiers:
    • 1.0 k[c] + 1.0 h[e] <=> 1.0 h[c] + 1.0 k[e]
  • With common name(s):
    • 1.0 Potassium[c] + 1.0 H+[e] <=> 1.0 H+[c] + 1.0 Potassium[e]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR100939
  • BioCyc : META:TRANS-RXN-42