Difference between revisions of "Kt3r"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CSND CSND] == * direction: ** LEFT-TO-RIGHT * common name: ** Cytosine deaminase * Synonym(s): ==...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ACLDC ACLDC] == * direction: ** LEFT-TO-RIGHT * common name: ** Acetolactate decarboxylase * Synony...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/CSND CSND] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ACLDC ACLDC] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Cytosine deaminase
+
** Acetolactate decarboxylase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h]][c] '''+''' 1.0 [[csn]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[nh4]][c] '''+''' 1.0 [[ura]][c]
+
** 1.0 [[h]][c] '''+''' 1.0 [[alac__S]][c] '''=>''' 1.0 [[co2]][c] '''+''' 1.0 [[actn__R]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 H+[c] '''+''' 1.0 Cytosine[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Ammonium[c] '''+''' 1.0 Uracil[c]
+
** 1.0 H+[c] '''+''' 1.0 (S)-2-Acetolactate[c] '''=>''' 1.0 CO2 CO2[c] '''+''' 1.0 R  Acetoin C4H8O2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF2206]]
+
* [[EF1214]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
* [[EF0390]]
+
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
 
== Pathways  ==
 
== Pathways  ==
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
+
* [[map00660]]: [http://www.genome.jp/dbget-bin/www_bget?map00660 map00660]
** '''82''' reactions found over '''244''' reactions in the full pathway
+
** '''3''' reactions found over '''21''' reactions in the full pathway
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
+
* [[map00650]]: [http://www.genome.jp/dbget-bin/www_bget?map00650 map00650]
** '''460''' reactions found over '''2349''' reactions in the full pathway
+
** '''14''' reactions found over '''156''' reactions in the full pathway
* [[map00330]]: [http://www.genome.jp/dbget-bin/www_bget?map00330 map00330]
+
** '''22''' reactions found over '''149''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
*** [[l_plantarum_wcfs1]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20605 20605]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21580 21580]
* BioCyc : META:CYTDEAM-RXN
+
* BioCyc : META:ACETOLACTATE-DECARBOXYLASE-RXN
* MetaNetX (MNX) Equation : MNXR96927
+
* MetaNetX (MNX) Equation : MNXR95270
* KEGG Reaction : R00974
+
* KEGG Reaction : R02948
* EC Number : 3.5.4.1
+
* EC Number : 4.1.1.5
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Cytosine deaminase}}
+
{{#set: common name=Acetolactate decarboxylase}}
{{#set: gene associated=EF2206|EF0390}}
+
{{#set: gene associated=EF1214}}
{{#set: in pathway=map00240|map01100|map00330}}
+
{{#set: in pathway=map00660|map00650}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}
 

Revision as of 19:36, 18 March 2018

Reaction ACLDC

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Acetolactate decarboxylase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H+[c] + 1.0 (S)-2-Acetolactate[c] => 1.0 CO2 CO2[c] + 1.0 R Acetoin C4H8O2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:ACETOLACTATE-DECARBOXYLASE-RXN
  • MetaNetX (MNX) Equation : MNXR95270
  • KEGG Reaction : R02948
  • EC Number : 4.1.1.5