Difference between revisions of "Map00220"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MDDCP4ppc MDDCP4ppc] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00220 map00220] == * common_name: ** Arginine biosynthesis * Synonym(s): == Reaction(s) found ==...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/MDDCP4ppc MDDCP4ppc] ==
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00220 map00220] ==
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* direction:
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* common_name:
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** LEFT-TO-RIGHT
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** Arginine biosynthesis
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''9''' reactions found over '''65''' reactions in the full pathway
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** 1.0 [[h2o]][c] '''+''' 1.0 [[murein5p4p]][c] '''=>''' 1.0 [[murein4p4p]][c] '''+''' 1.0 [[ala__D]][c]
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* [[ACGS]]
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* With common name(s):
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** 0 associated gene:
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** 1.0 H2O H2O[c] '''+''' 1.0 Two linked disacharide pentapeptide and tetrapeptide murein units (uncrosslinked, middle of chain)[c] '''=>''' 1.0 Two linked disacharide tetrapeptide murein units (uncrosslinked, middle of chain)[c] '''+''' 1.0 D-Alanine[c]
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** 1 reconstruction source(s) associated:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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== Genes associated with this reaction  ==
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* [[ALATA_L]]
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Genes have been associated with this reaction based on different elements listed below.
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** 3 associated gene(s):
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* [[EF3129]]
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*** [[EF2372]]
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** MANUAL
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*** [[EF1314]]
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== Pathways  ==
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*** [[EF1706]]
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== Reconstruction information  ==
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** 1 reconstruction source(s) associated:
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* [[manual]]:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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** [[this was a reaction occurring in the perisplasm of e. coli]]
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* [[ASNN]]
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** 2 associated gene(s):
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*** [[EF1163]]
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*** [[EF1158]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[ASPTA]]
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** 1 associated gene(s):
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*** [[EF2372]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[CBMKr]]
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** 1 associated gene(s):
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*** [[EF2575]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[GLNS]]
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** 1 associated gene(s):
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*** [[EF2159]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[GLUDxi]]
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** 1 associated gene(s):
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*** [[EF1415]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [[GLUDy]]
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** 1 associated gene(s):
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*** [[EF1415]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[OCBT]]
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** 1 associated gene(s):
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*** [[EF0105]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-l_plantarum_wcfs1]]
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== Reaction(s) not found ==
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* [http://bigg.ucsd.edu/universal/reactions/3SALATAi 3SALATAi]
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* [http://bigg.ucsd.edu/universal/reactions/3SALATAim 3SALATAim]
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* [http://bigg.ucsd.edu/universal/reactions/AATC AATC]
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* [http://bigg.ucsd.edu/universal/reactions/AATG AATG]
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* [http://bigg.ucsd.edu/universal/reactions/AATGm AATGm]
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* [http://bigg.ucsd.edu/universal/reactions/ACGK ACGK]
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* [http://bigg.ucsd.edu/universal/reactions/ACGKm ACGKm]
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* [http://bigg.ucsd.edu/universal/reactions/ACGSm ACGSm]
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* [http://bigg.ucsd.edu/universal/reactions/ACODA ACODA]
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* [http://bigg.ucsd.edu/universal/reactions/ACOTA ACOTA]
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* [http://bigg.ucsd.edu/universal/reactions/ACOTAim ACOTAim]
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* [http://bigg.ucsd.edu/universal/reactions/AGPR AGPR]
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* [http://bigg.ucsd.edu/universal/reactions/AGPRim AGPRim]
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* [http://bigg.ucsd.edu/universal/reactions/ALATA_Lm ALATA_Lm]
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* [http://bigg.ucsd.edu/universal/reactions/ALPHNH ALPHNH]
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* [http://bigg.ucsd.edu/universal/reactions/ALPHm ALPHm]
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* [http://bigg.ucsd.edu/universal/reactions/ARGDI ARGDI]
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* [http://bigg.ucsd.edu/universal/reactions/ARGDr ARGDr]
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* [http://bigg.ucsd.edu/universal/reactions/ARGN ARGN]
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* [http://bigg.ucsd.edu/universal/reactions/ARGNm ARGNm]
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* [http://bigg.ucsd.edu/universal/reactions/ARGSL ARGSL]
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* [http://bigg.ucsd.edu/universal/reactions/ARGSS ARGSS]
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* [http://bigg.ucsd.edu/universal/reactions/ARGSS_1 ARGSS_1]
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* [http://bigg.ucsd.edu/universal/reactions/ASNNe ASNNe]
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* [http://bigg.ucsd.edu/universal/reactions/ASNNm ASNNm]
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* [http://bigg.ucsd.edu/universal/reactions/ASNNpp ASNNpp]
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* [http://bigg.ucsd.edu/universal/reactions/ASPATh ASPATh]
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* [http://bigg.ucsd.edu/universal/reactions/ASPSE ASPSE]
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* [http://bigg.ucsd.edu/universal/reactions/ASPTAm ASPTAm]
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* [http://bigg.ucsd.edu/universal/reactions/ASPTAp ASPTAp]
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* [http://bigg.ucsd.edu/universal/reactions/CPS CPS]
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* [http://bigg.ucsd.edu/universal/reactions/GALh GALh]
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* [http://bigg.ucsd.edu/universal/reactions/GALm GALm]
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* [http://bigg.ucsd.edu/universal/reactions/GDH GDH]
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* [http://bigg.ucsd.edu/universal/reactions/GDH1 GDH1]
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* [http://bigg.ucsd.edu/universal/reactions/GDH_nadp GDH_nadp]
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* [http://bigg.ucsd.edu/universal/reactions/GLNSP1 GLNSP1]
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* [http://bigg.ucsd.edu/universal/reactions/GLNSP2 GLNSP2]
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* [http://bigg.ucsd.edu/universal/reactions/GLNSP3 GLNSP3]
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* [http://bigg.ucsd.edu/universal/reactions/GLUDym GLUDym]
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* [http://bigg.ucsd.edu/universal/reactions/LCYSTAT LCYSTAT]
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* [http://bigg.ucsd.edu/universal/reactions/LCYSTATm LCYSTATm]
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* [http://bigg.ucsd.edu/universal/reactions/NOS NOS]
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* [http://bigg.ucsd.edu/universal/reactions/NOS1 NOS1]
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* [http://bigg.ucsd.edu/universal/reactions/NOS2 NOS2]
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* [http://bigg.ucsd.edu/universal/reactions/NOS2_1 NOS2_1]
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* [http://bigg.ucsd.edu/universal/reactions/OCBTm OCBTm]
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* [http://bigg.ucsd.edu/universal/reactions/OCT OCT]
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* [http://bigg.ucsd.edu/universal/reactions/OCTh OCTh]
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* [http://bigg.ucsd.edu/universal/reactions/OCTm OCTm]
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* [http://bigg.ucsd.edu/universal/reactions/ORNTAC ORNTAC]
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* [http://bigg.ucsd.edu/universal/reactions/ORNTACim ORNTACim]
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* [http://bigg.ucsd.edu/universal/reactions/URCB URCB]
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* [http://bigg.ucsd.edu/universal/reactions/URCBm URCBm]
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* [http://bigg.ucsd.edu/universal/reactions/UREA UREA]
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* [http://bigg.ucsd.edu/universal/reactions/UREASE UREASE]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common_name=Arginine biosynthesis}}
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{{#set: gene associated=EF3129}}
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{{#set: reaction found=9}}
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{{#set: in pathway=}}
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{{#set: total reaction=65}}
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{{#set: reconstruction category=manual}}
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{{#set: completion rate=14.0}}
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{{#set: reconstruction source=this was a reaction occurring in the perisplasm of e. coli}}
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Latest revision as of 16:08, 21 March 2018

Pathway map00220

  • common_name:
    • Arginine biosynthesis
  • Synonym(s):

Reaction(s) found

9 reactions found over 65 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=Map00220&oldid=8704"