Difference between revisions of "Map00340"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00261 map00261] == * common_name: ** Monobactam biosynthesis * Synonym(s): == Reaction(s) found ==...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/THDPS THDPS] == * direction: ** LEFT-TO-RIGHT * common name: ** Tetrahydrodipicolinate succinylase...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00261 map00261] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/THDPS THDPS] ==
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* common_name:
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* direction:
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** Monobactam biosynthesis
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** LEFT-TO-RIGHT
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* common name:
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** Tetrahydrodipicolinate succinylase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''3''' reaction(s) found
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* With identifiers:
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** [[ASAD]]
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** 1.0 [[succoa]][c] '''+''' 1.0 [[thdp]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[coa]][c] '''+''' 1.0 [[sl2a6o]][c]
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** [[THPAT]]
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* With common name(s):
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** [[ASPK]]
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** 1.0 Succinyl-CoA[c] '''+''' 1.0 2,3,4,5-Tetrahydrodipicolinate[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Coenzyme A[c] '''+''' 1.0 N-Succinyl-2-L-amino-6-oxoheptanedioate[c]
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== Reaction(s) not found ==
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* '''5''' reaction(s) not found
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== Genes associated with this reaction  ==
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** [http://bigg.ucsd.edu/universal/reactions/ASADH ASADH]
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Genes have been associated with this reaction based on different elements listed below.
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** [http://bigg.ucsd.edu/universal/reactions/SELADT SELADT]
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* [[EF1133]]
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** [http://bigg.ucsd.edu/universal/reactions/SADT SADT]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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** [http://bigg.ucsd.edu/universal/reactions/ASPK_1 ASPK_1]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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** [http://bigg.ucsd.edu/universal/reactions/SADT2 SADT2]
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== Pathways  ==
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
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** '''104''' reactions found over '''715''' reactions in the full pathway
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* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
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** '''56''' reactions found over '''228''' reactions in the full pathway
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* [[map00300]]: [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300]
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** '''13''' reactions found over '''34''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[e_coli_sstr_k12_substr_mg1655]]
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*** [[l_plantarum_wcfs1]]
 
== External links  ==
 
== External links  ==
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{{#set: common_name=Monobactam biosynthesis}}
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* RHEA:
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{{#set: reaction found=3}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17325 17325]
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{{#set: reaction not found=5}}
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* BioCyc : META:TETHYDPICSUCC-RXN
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* MetaNetX (MNX) Equation : MNXR104806
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* KEGG Reaction : R04365
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* EC Number : 2.3.1.117
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Tetrahydrodipicolinate succinylase}}
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{{#set: gene associated=EF1133}}
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{{#set: in pathway=map01100|map01120|map01230|map00300}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}

Revision as of 16:33, 10 January 2018

Reaction THDPS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Tetrahydrodipicolinate succinylase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Succinyl-CoA[c] + 1.0 2,3,4,5-Tetrahydrodipicolinate[c] + 1.0 H2O H2O[c] => 1.0 Coenzyme A[c] + 1.0 N-Succinyl-2-L-amino-6-oxoheptanedioate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:TETHYDPICSUCC-RXN
  • MetaNetX (MNX) Equation : MNXR104806
  • KEGG Reaction : R04365
  • EC Number : 2.3.1.117




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