Difference between revisions of "Map00340"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/THDPS THDPS] == * direction: ** LEFT-TO-RIGHT * common name: ** Tetrahydrodipicolinate succinylase...")
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00340 map00340] == * common_name: ** Histidine metabolism * Synonym(s): == Reaction(s) found == '...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/THDPS THDPS] ==
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00340 map00340] ==
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* direction:
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* common_name:
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** LEFT-TO-RIGHT
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** Histidine metabolism
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* common name:
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** Tetrahydrodipicolinate succinylase
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''6''' reactions found over '''90''' reactions in the full pathway
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** 1.0 [[succoa]][c] '''+''' 1.0 [[thdp]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[coa]][c] '''+''' 1.0 [[sl2a6o]][c]
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* [[ABUTD]]
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* With common name(s):
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** 1 associated gene(s):
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** 1.0 Succinyl-CoA[c] '''+''' 1.0 2,3,4,5-Tetrahydrodipicolinate[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Coenzyme A[c] '''+''' 1.0 N-Succinyl-2-L-amino-6-oxoheptanedioate[c]
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*** [[EF0253]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[ALDD2x]]
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* [[EF1133]]
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** 1 associated gene(s):
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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*** [[EF0253]]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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** 1 reconstruction source(s) associated:
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== Pathways  ==
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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* [[ALDD2y]]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
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** 1 associated gene(s):
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
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*** [[EF0253]]
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** '''104''' reactions found over '''715''' reactions in the full pathway
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** 1 reconstruction source(s) associated:
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* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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** '''56''' reactions found over '''228''' reactions in the full pathway
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* [[GLYALDDr]]
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* [[map00300]]: [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300]
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** 1 associated gene(s):
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** '''13''' reactions found over '''34''' reactions in the full pathway
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*** [[EF0253]]
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== Reconstruction information  ==
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** 1 reconstruction source(s) associated:
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* [[orthology]]:
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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** [[pantograph]]:
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* [[PHETA1]]
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*** [[e_coli_sstr_k12_substr_mg1655]]
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** 1 associated gene(s):
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*** [[l_plantarum_wcfs1]]
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*** [[EF1793]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[TYRCBOX]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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== Reaction(s) not found ==
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* [http://bigg.ucsd.edu/universal/reactions/34DHPLACOX_NADP 34DHPLACOX_NADP]
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* [http://bigg.ucsd.edu/universal/reactions/34DHXMANDACOX 34DHXMANDACOX]
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* [http://bigg.ucsd.edu/universal/reactions/34DHXMANDACOX_NADP 34DHXMANDACOX_NADP]
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* [http://bigg.ucsd.edu/universal/reactions/3HLYTCL 3HLYTCL]
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* [http://bigg.ucsd.edu/universal/reactions/3HXKYNOXDA 3HXKYNOXDA]
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* [http://bigg.ucsd.edu/universal/reactions/3M4HDXPAC 3M4HDXPAC]
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* [http://bigg.ucsd.edu/universal/reactions/3MOX4HOXPGALDOX 3MOX4HOXPGALDOX]
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* [http://bigg.ucsd.edu/universal/reactions/3MOX4HOXPGALDOX_NADP 3MOX4HOXPGALDOX_NADP]
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* [http://bigg.ucsd.edu/universal/reactions/3MOXTYROX 3MOXTYROX]
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* [http://bigg.ucsd.edu/universal/reactions/41R1H2MAE12BOOX 41R1H2MAE12BOOX]
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* [http://bigg.ucsd.edu/universal/reactions/41R2A1H12BOOX 41R2A1H12BOOX]
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* [http://bigg.ucsd.edu/universal/reactions/4ABUTD 4ABUTD]
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* [http://bigg.ucsd.edu/universal/reactions/4HOXPACDOX_NADP 4HOXPACDOX_NADP]
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* [http://bigg.ucsd.edu/universal/reactions/5HLTDL 5HLTDL]
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* [http://bigg.ucsd.edu/universal/reactions/5HOXINDACTOX 5HOXINDACTOX]
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* [http://bigg.ucsd.edu/universal/reactions/5HOXINDACTOXm 5HOXINDACTOXm]
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* [http://bigg.ucsd.edu/universal/reactions/5HOXINOXDA 5HOXINOXDA]
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* [http://bigg.ucsd.edu/universal/reactions/5HXKYNDCL 5HXKYNDCL]
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* [http://bigg.ucsd.edu/universal/reactions/5HXKYNOXDA 5HXKYNOXDA]
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* [http://bigg.ucsd.edu/universal/reactions/AABHH AABHH]
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* [http://bigg.ucsd.edu/universal/reactions/ABOR ABOR]
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* [http://bigg.ucsd.edu/universal/reactions/ABUTDm ABUTDm]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD19x_P ALDD19x_P]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD19xr ALDD19xr]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD20x ALDD20x]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD20xm ALDD20xm]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD20y ALDD20y]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD20ym ALDD20ym]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD22x ALDD22x]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD2xm ALDD2xm]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD2ym ALDD2ym]
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* [http://bigg.ucsd.edu/universal/reactions/ALDH ALDH]
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* [http://bigg.ucsd.edu/universal/reactions/AMPTASECG AMPTASECG]
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* [http://bigg.ucsd.edu/universal/reactions/AMPTASECGe AMPTASECGe]
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* [http://bigg.ucsd.edu/universal/reactions/AOOAh AOOAh]
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* [http://bigg.ucsd.edu/universal/reactions/APRTO2 APRTO2]
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* [http://bigg.ucsd.edu/universal/reactions/ARMT ARMT]
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* [http://bigg.ucsd.edu/universal/reactions/ATPPRT ATPPRT]
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* [http://bigg.ucsd.edu/universal/reactions/BADP BADP]
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* [http://bigg.ucsd.edu/universal/reactions/DDMCITALOR DDMCITALOR]
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* [http://bigg.ucsd.edu/universal/reactions/DMCITALOR DMCITALOR]
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* [http://bigg.ucsd.edu/universal/reactions/FGLU FGLU]
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* [http://bigg.ucsd.edu/universal/reactions/FORGLUIH FORGLUIH]
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* [http://bigg.ucsd.edu/universal/reactions/GLACO GLACO]
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* [http://bigg.ucsd.edu/universal/reactions/GLACOm GLACOm]
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* [http://bigg.ucsd.edu/universal/reactions/GLUFT GLUFT]
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* [http://bigg.ucsd.edu/universal/reactions/GluForTx GluForTx]
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* [http://bigg.ucsd.edu/universal/reactions/HDC HDC]
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* [http://bigg.ucsd.edu/universal/reactions/HDH HDH]
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* [http://bigg.ucsd.edu/universal/reactions/HDHh HDHh]
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* [http://bigg.ucsd.edu/universal/reactions/HISDC HISDC]
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* [http://bigg.ucsd.edu/universal/reactions/HISDr HISDr]
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* [http://bigg.ucsd.edu/universal/reactions/HISTD HISTD]
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* [http://bigg.ucsd.edu/universal/reactions/HISTP HISTP]
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* [http://bigg.ucsd.edu/universal/reactions/HP HP]
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* [http://bigg.ucsd.edu/universal/reactions/HPh HPh]
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* [http://bigg.ucsd.edu/universal/reactions/HSTPT HSTPT]
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* [http://bigg.ucsd.edu/universal/reactions/IG3PS IG3PS]
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* [http://bigg.ucsd.edu/universal/reactions/IGPDH IGPDH]
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* [http://bigg.ucsd.edu/universal/reactions/IGPDh IGPDh]
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* [http://bigg.ucsd.edu/universal/reactions/IMACTD IMACTD]
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* [http://bigg.ucsd.edu/universal/reactions/IMACTD_m IMACTD_m]
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* [http://bigg.ucsd.edu/universal/reactions/IMGPSh IMGPSh]
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* [http://bigg.ucsd.edu/universal/reactions/IZPN IZPN]
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* [http://bigg.ucsd.edu/universal/reactions/LALGP LALGP]
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* [http://bigg.ucsd.edu/universal/reactions/LTDCL LTDCL]
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* [http://bigg.ucsd.edu/universal/reactions/MAOLNOR MAOLNOR]
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* [http://bigg.ucsd.edu/universal/reactions/NABTNO NABTNO]
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* [http://bigg.ucsd.edu/universal/reactions/NABTNOm NABTNOm]
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* [http://bigg.ucsd.edu/universal/reactions/NACASPAH NACASPAH]
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* [http://bigg.ucsd.edu/universal/reactions/NFORGLUAH NFORGLUAH]
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* [http://bigg.ucsd.edu/universal/reactions/PHETA1m PHETA1m]
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* [http://bigg.ucsd.edu/universal/reactions/POATh POATh]
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* [http://bigg.ucsd.edu/universal/reactions/PRACHh PRACHh]
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* [http://bigg.ucsd.edu/universal/reactions/PRADPh PRADPh]
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* [http://bigg.ucsd.edu/universal/reactions/PRAMPC PRAMPC]
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* [http://bigg.ucsd.edu/universal/reactions/PRATPP PRATPP]
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* [http://bigg.ucsd.edu/universal/reactions/PRICIh PRICIh]
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* [http://bigg.ucsd.edu/universal/reactions/PRMICI PRMICI]
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* [http://bigg.ucsd.edu/universal/reactions/PYLALDOX PYLALDOX]
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* [http://bigg.ucsd.edu/universal/reactions/PYLALDOXm PYLALDOXm]
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* [http://bigg.ucsd.edu/universal/reactions/SAMHISTA SAMHISTA]
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* [http://bigg.ucsd.edu/universal/reactions/URCN URCN]
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* [http://bigg.ucsd.edu/universal/reactions/URCN_1 URCN_1]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: common_name=Histidine metabolism}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17325 17325]
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{{#set: reaction found=6}}
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* BioCyc : META:TETHYDPICSUCC-RXN
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{{#set: total reaction=90}}
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* MetaNetX (MNX) Equation : MNXR104806
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{{#set: completion rate=7.0}}
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* KEGG Reaction : R04365
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* EC Number : 2.3.1.117
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Tetrahydrodipicolinate succinylase}}
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{{#set: gene associated=EF1133}}
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{{#set: in pathway=map01100|map01120|map01230|map00300}}
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−
{{#set: reconstruction category=orthology}}
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−
{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}
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Latest revision as of 16:06, 21 March 2018

Pathway map00340

  • common_name:
    • Histidine metabolism
  • Synonym(s):

Reaction(s) found

6 reactions found over 90 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=Map00340&oldid=8520"