Difference between revisions of "Map00401"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DAPE DAPE] == * direction: ** REVERSIBLE * common name: ** Diaminopimelate epimerase * Synonym(s):...")
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00401 map00401] == * common_name: ** Novobiocin biosynthesis * Synonym(s): == Reaction(s) found ==...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/DAPE DAPE] ==
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00401 map00401] ==
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* direction:
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* common_name:
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** REVERSIBLE
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** Novobiocin biosynthesis
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* common name:
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** Diaminopimelate epimerase
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''17''' reactions in the full pathway
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** 1.0 [[26dap_LL]][c] '''<=>''' 1.0 [[26dap__M]][c]
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* [[ASPTA]]
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* With common name(s):
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** 1 associated gene(s):
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** 1.0 LL-2,6-Diaminoheptanedioate[c] '''<=>''' 1.0 Meso-2,6-Diaminoheptanedioate[c]
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*** [[EF2372]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-l_plantarum_wcfs1]]
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* [[EF0464]]
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* [[PHETA1]]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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** 1 associated gene(s):
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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*** [[EF1793]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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** 1 reconstruction source(s) associated:
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== Pathways  ==
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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== Reaction(s) not found ==
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** '''460''' reactions found over '''2349''' reactions in the full pathway
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* [http://bigg.ucsd.edu/universal/reactions/3SALATAi 3SALATAi]
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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* [http://bigg.ucsd.edu/universal/reactions/3SALATAim 3SALATAim]
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** '''179''' reactions found over '''1054''' reactions in the full pathway
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* [http://bigg.ucsd.edu/universal/reactions/AATC AATC]
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* [[map00300]]: [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300]
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* [http://bigg.ucsd.edu/universal/reactions/AATG AATG]
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** '''13''' reactions found over '''34''' reactions in the full pathway
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* [http://bigg.ucsd.edu/universal/reactions/AATGm AATGm]
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
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* [http://bigg.ucsd.edu/universal/reactions/AOOAh AOOAh]
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** '''104''' reactions found over '''715''' reactions in the full pathway
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* [http://bigg.ucsd.edu/universal/reactions/ARAT ARAT]
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* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
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* [http://bigg.ucsd.edu/universal/reactions/ASPATh ASPATh]
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** '''56''' reactions found over '''228''' reactions in the full pathway
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* [http://bigg.ucsd.edu/universal/reactions/ASPTAm ASPTAm]
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* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
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* [http://bigg.ucsd.edu/universal/reactions/ASPTAp ASPTAp]
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** '''135''' reactions found over '''694''' reactions in the full pathway
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* [http://bigg.ucsd.edu/universal/reactions/HSTPT HSTPT]
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== Reconstruction information  ==
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* [http://bigg.ucsd.edu/universal/reactions/LCYSTAT LCYSTAT]
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* [[orthology]]:
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* [http://bigg.ucsd.edu/universal/reactions/LCYSTATm LCYSTATm]
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** [[pantograph]]:
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* [http://bigg.ucsd.edu/universal/reactions/PHETA1m PHETA1m]
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*** [[e_coli_sstr_k12_substr_mg1655]]
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* [http://bigg.ucsd.edu/universal/reactions/POATh POATh]
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*** [[l_plantarum_wcfs1]]
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*** [[b_subtilis_subsp_subtilis_str168]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: common_name=Novobiocin biosynthesis}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15393 15393]
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{{#set: reaction found=2}}
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* BioCyc : META:DIAMINOPIMEPIM-RXN
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{{#set: total reaction=17}}
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* MetaNetX (MNX) Equation : MNXR97143
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{{#set: completion rate=12.0}}
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* KEGG Reaction : R02735
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* EC Number : 5.1.1.7
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Diaminopimelate epimerase}}
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{{#set: gene associated=EF0464}}
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{{#set: in pathway=map01100|map01110|map00300|map01120|map01230|map01130}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
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Latest revision as of 16:07, 21 March 2018

Pathway map00401

  • common_name:
    • Novobiocin biosynthesis
  • Synonym(s):

Reaction(s) found

2 reactions found over 17 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=Map00401&oldid=8628"