Difference between revisions of "Map00680"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00680 map00680] == * common_name: ** Methane metabolism * Synonym(s): == Reaction(s) found == '''...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00770 map00770] ==
+
== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00680 map00680] ==
 
* common_name:
 
* common_name:
−
** Pantothenate and CoA biosynthesis
+
** Methane metabolism
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''17''' reactions found over '''75''' reactions in the full pathway
+
  '''18''' reactions found over '''75''' reactions in the full pathway
−
* [[ACHBS]]
+
* [[ACKr]]
−
* [[ACLS]]
+
** 1 associated gene(s):
−
* [[ACPS1]]
+
*** [[EF1983]]
−
* [[APNPT]]
+
** 3 reconstruction source(s) associated:
−
* [[ASP1DC]]
+
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
* [[DPCOAK]]
+
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
−
* [[DPR]]
+
*** [[orthology-l_plantarum_wcfs1]]
−
* [[ILETA]]
+
* [[ALDD1]]
−
* [[MOHMT]]
+
** 1 associated gene(s):
−
* [[NADDP]]
+
*** [[EF0253]]
−
* [[PANTS]]
+
** 1 reconstruction source(s) associated:
−
* [[PNTK]]
+
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
−
* [[PPCDC]]
+
* [[ENO]]
−
* [[PPNCL]]
+
** 1 associated gene(s):
−
* [[PPNCL2]]
+
*** [[EF1961]]
−
* [[PTPATi]]
+
** 3 reconstruction source(s) associated:
−
* [[VALTA]]
+
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[FBA]]
 +
** 1 associated gene(s):
 +
*** [[EF1167]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[FBA2]]
 +
** 1 associated gene(s):
 +
*** [[EF1167]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* [[FBP]]
 +
** 1 associated gene(s):
 +
*** [[EF1503]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* [[GHMT2r]]
 +
** 1 associated gene(s):
 +
*** [[EF2550]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[GLYCK2]]
 +
** 1 associated gene(s):
 +
*** [[EF2646]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
* [[HPYRRx]]
 +
** 1 associated gene(s):
 +
*** [[EF3141]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
* [[MDH]]
 +
** 3 associated gene(s):
 +
*** [[EF0641]]
 +
*** [[EF0255]]
 +
*** [[EF0388]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[PFK]]
 +
** 4 associated gene(s):
 +
*** [[EF1045]]
 +
*** [[EF1806]]
 +
*** [[EF0718]]
 +
*** [[EF0693]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[PFK_3]]
 +
** 1 associated gene(s):
 +
*** [[EF1045]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
* [[PGCD]]
 +
** 2 associated gene(s):
 +
*** [[EF2901]]
 +
*** [[EF3141]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[PGM]]
 +
** 2 associated gene(s):
 +
*** [[EF2664]]
 +
*** [[EF0195]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
* [[PPS]]
 +
** 1 associated gene(s):
 +
*** [[EF1024]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[PTA2]]
 +
** 1 associated gene(s):
 +
*** [[EF0949]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* [[PTAr]]
 +
** 1 associated gene(s):
 +
*** [[EF0949]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** [[orthology-l_plantarum_wcfs1]]
 +
* [[TYRCBOX]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://bigg.ucsd.edu/universal/reactions/56DH5FLURAAMH 56DH5FLURAAMH]
+
* [http://bigg.ucsd.edu/universal/reactions/7MHTS 7MHTS]
−
* [http://bigg.ucsd.edu/universal/reactions/5FLURAOR 5FLURAOR]
+
* [http://bigg.ucsd.edu/universal/reactions/ACKrh ACKrh]
−
* [http://bigg.ucsd.edu/universal/reactions/ACAS_2ahbut ACAS_2ahbut]
+
* [http://bigg.ucsd.edu/universal/reactions/ACKrm ACKrm]
−
* [http://bigg.ucsd.edu/universal/reactions/ACHBSm ACHBSm]
+
* [http://bigg.ucsd.edu/universal/reactions/ACS ACS]
−
* [http://bigg.ucsd.edu/universal/reactions/ACLSm ACLSm]
+
* [http://bigg.ucsd.edu/universal/reactions/ACSm ACSm]
−
* [http://bigg.ucsd.edu/universal/reactions/ACPS1_1 ACPS1_1]
+
* [http://bigg.ucsd.edu/universal/reactions/ACSp ACSp]
−
* [http://bigg.ucsd.edu/universal/reactions/ACPS1h ACPS1h]
+
* [http://bigg.ucsd.edu/universal/reactions/ALCD1 ALCD1]
−
* [http://bigg.ucsd.edu/universal/reactions/ACPpds ACPpds]
+
* [http://bigg.ucsd.edu/universal/reactions/BFBP BFBP]
−
* [http://bigg.ucsd.edu/universal/reactions/AFLBURPPAAMH AFLBURPPAAMH]
+
* [http://bigg.ucsd.edu/universal/reactions/BFBPh BFBPh]
−
* [http://bigg.ucsd.edu/universal/reactions/APCPT APCPT]
+
* [http://bigg.ucsd.edu/universal/reactions/CH2ACH CH2ACH]
−
* [http://bigg.ucsd.edu/universal/reactions/APLh APLh]
+
* [http://bigg.ucsd.edu/universal/reactions/CH3ACH CH3ACH]
−
* [http://bigg.ucsd.edu/universal/reactions/APLm APLm]
+
* [http://bigg.ucsd.edu/universal/reactions/COBS COBS]
−
* [http://bigg.ucsd.edu/universal/reactions/APPAT APPAT]
+
* [http://bigg.ucsd.edu/universal/reactions/DHAK DHAK]
−
* [http://bigg.ucsd.edu/universal/reactions/BCTA_val_h BCTA_val_h]
+
* [http://bigg.ucsd.edu/universal/reactions/DMAMT DMAMT]
−
* [http://bigg.ucsd.edu/universal/reactions/BCTAh BCTAh]
+
* [http://bigg.ucsd.edu/universal/reactions/ENOf ENOf]
−
* [http://bigg.ucsd.edu/universal/reactions/BUPN BUPN]
+
* [http://bigg.ucsd.edu/universal/reactions/ENOm ENOm]
−
* [http://bigg.ucsd.edu/universal/reactions/DHAD1 DHAD1]
+
* [http://bigg.ucsd.edu/universal/reactions/FBA3 FBA3]
−
* [http://bigg.ucsd.edu/universal/reactions/DHAD1m DHAD1m]
+
* [http://bigg.ucsd.edu/universal/reactions/FBA3hi FBA3hi]
−
* [http://bigg.ucsd.edu/universal/reactions/DHAD2 DHAD2]
+
* [http://bigg.ucsd.edu/universal/reactions/FBAf FBAf]
−
* [http://bigg.ucsd.edu/universal/reactions/DHAD2m DHAD2m]
+
* [http://bigg.ucsd.edu/universal/reactions/FBAh FBAh]
−
* [http://bigg.ucsd.edu/universal/reactions/DHAD_3mob_h DHAD_3mob_h]
+
* [http://bigg.ucsd.edu/universal/reactions/FBAm FBAm]
−
* [http://bigg.ucsd.edu/universal/reactions/DHADh DHADh]
+
* [http://bigg.ucsd.edu/universal/reactions/FDH FDH]
−
* [http://bigg.ucsd.edu/universal/reactions/DHPD DHPD]
+
* [http://bigg.ucsd.edu/universal/reactions/FPGPL FPGPL]
−
* [http://bigg.ucsd.edu/universal/reactions/DHPM1 DHPM1]
+
* [http://bigg.ucsd.edu/universal/reactions/GF4GL_0 GF4GL_0]
−
* [http://bigg.ucsd.edu/universal/reactions/DHPM2 DHPM2]
+
* [http://bigg.ucsd.edu/universal/reactions/GHMT2rm GHMT2rm]
−
* [http://bigg.ucsd.edu/universal/reactions/DMORh DMORh]
+
* [http://bigg.ucsd.edu/universal/reactions/GLYCDH_1 GLYCDH_1]
−
* [http://bigg.ucsd.edu/universal/reactions/DNADDP DNADDP]
+
* [http://bigg.ucsd.edu/universal/reactions/LPFPLT LPFPLT]
−
* [http://bigg.ucsd.edu/universal/reactions/DPCOAKm DPCOAKm]
+
* [http://bigg.ucsd.edu/universal/reactions/LPPGS LPPGS]
−
* [http://bigg.ucsd.edu/universal/reactions/DPCOAPP DPCOAPP]
+
* [http://bigg.ucsd.edu/universal/reactions/MCMMT MCMMT]
−
* [http://bigg.ucsd.edu/universal/reactions/DPRm DPRm]
+
* [http://bigg.ucsd.edu/universal/reactions/MDHf MDHf]
−
* [http://bigg.ucsd.edu/universal/reactions/DURAD DURAD]
+
* [http://bigg.ucsd.edu/universal/reactions/MDHh MDHh]
−
* [http://bigg.ucsd.edu/universal/reactions/DURAD2 DURAD2]
+
* [http://bigg.ucsd.edu/universal/reactions/MDHi2 MDHi2]
−
* [http://bigg.ucsd.edu/universal/reactions/DURADx DURADx]
+
* [http://bigg.ucsd.edu/universal/reactions/MDHm MDHm]
−
* [http://bigg.ucsd.edu/universal/reactions/FADDP FADDP]
+
* [http://bigg.ucsd.edu/universal/reactions/MDHp MDHp]
−
* [http://bigg.ucsd.edu/universal/reactions/ILETAm ILETAm]
+
* [http://bigg.ucsd.edu/universal/reactions/OHPBAT OHPBAT]
−
* [http://bigg.ucsd.edu/universal/reactions/KARA1 KARA1]
+
* [http://bigg.ucsd.edu/universal/reactions/PCPPTh PCPPTh]
−
* [http://bigg.ucsd.edu/universal/reactions/KARA1im KARA1im]
+
* [http://bigg.ucsd.edu/universal/reactions/PCPPTm PCPPTm]
−
* [http://bigg.ucsd.edu/universal/reactions/KARA2 KARA2]
+
* [http://bigg.ucsd.edu/universal/reactions/PFK_adp PFK_adp]
−
* [http://bigg.ucsd.edu/universal/reactions/KARA2im KARA2im]
+
* [http://bigg.ucsd.edu/universal/reactions/PFKh PFKh]
−
* [http://bigg.ucsd.edu/universal/reactions/KARI_23dhmb KARI_23dhmb]
+
* [http://bigg.ucsd.edu/universal/reactions/PGLYDH PGLYDH]
−
* [http://bigg.ucsd.edu/universal/reactions/KARI_23dhmp KARI_23dhmp]
+
* [http://bigg.ucsd.edu/universal/reactions/PGMf PGMf]
−
* [http://bigg.ucsd.edu/universal/reactions/MTMOHT MTMOHT]
+
* [http://bigg.ucsd.edu/universal/reactions/PGMm PGMm]
−
* [http://bigg.ucsd.edu/universal/reactions/NADDPe NADDPe]
+
* [http://bigg.ucsd.edu/universal/reactions/PPC PPC]
−
* [http://bigg.ucsd.edu/universal/reactions/NADDPp NADDPp]
+
* [http://bigg.ucsd.edu/universal/reactions/PSAT PSAT]
−
* [http://bigg.ucsd.edu/universal/reactions/NPH NPH]
+
* [http://bigg.ucsd.edu/universal/reactions/PSERT PSERT]
−
* [http://bigg.ucsd.edu/universal/reactions/PBAL PBAL]
+
* [http://bigg.ucsd.edu/universal/reactions/PSP PSP]
−
* [http://bigg.ucsd.edu/universal/reactions/PBALm PBALm]
+
* [http://bigg.ucsd.edu/universal/reactions/PSP_D PSP_D]
−
* [http://bigg.ucsd.edu/universal/reactions/PNCDC PNCDC]
+
* [http://bigg.ucsd.edu/universal/reactions/PSP_L PSP_L]
−
* [http://bigg.ucsd.edu/universal/reactions/PNORn PNORn]
+
* [http://bigg.ucsd.edu/universal/reactions/PSP_Lpp PSP_Lpp]
−
* [http://bigg.ucsd.edu/universal/reactions/PNTEH PNTEH]
+
* [http://bigg.ucsd.edu/universal/reactions/PTArh PTArh]
−
* [http://bigg.ucsd.edu/universal/reactions/PNTKm PNTKm]
+
* [http://bigg.ucsd.edu/universal/reactions/PTArm PTArm]
−
* [http://bigg.ucsd.edu/universal/reactions/PPATDh PPATDh]
+
* [http://bigg.ucsd.edu/universal/reactions/RH2CD RH2CD]
−
* [http://bigg.ucsd.edu/universal/reactions/PPNCL3 PPNCL3]
+
* [http://bigg.ucsd.edu/universal/reactions/RH3CD RH3CD]
−
* [http://bigg.ucsd.edu/universal/reactions/PTPATim PTPATim]
+
* [http://bigg.ucsd.edu/universal/reactions/SGAT SGAT]
−
* [http://bigg.ucsd.edu/universal/reactions/UDPGP UDPGP]
+
* [http://bigg.ucsd.edu/universal/reactions/SPDC SPDC]
−
* [http://bigg.ucsd.edu/universal/reactions/UDPGPpp UDPGPpp]
+
* [http://bigg.ucsd.edu/universal/reactions/SPT_syn SPT_syn]
−
* [http://bigg.ucsd.edu/universal/reactions/UPPN UPPN]
+
* [http://bigg.ucsd.edu/universal/reactions/TMAMT TMAMT]
−
* [http://bigg.ucsd.edu/universal/reactions/VALTAim VALTAim]
+
 
== External links  ==
 
== External links  ==
−
{{#set: common_name=Pantothenate and CoA biosynthesis}}
+
{{#set: common_name=Methane metabolism}}
−
{{#set: reaction found=17}}
+
{{#set: reaction found=18}}
−
{{#set: reaction not found=75}}
+
{{#set: total reaction=75}}
−
{{#set: completion rate=23.0}}
+
{{#set: completion rate=24.0}}

Latest revision as of 16:10, 21 March 2018

Pathway map00680

  • common_name:
    • Methane metabolism
  • Synonym(s):

Reaction(s) found

18 reactions found over 75 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=Map00680&oldid=8865"