Difference between revisions of "NDPK6"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/UAG4E UAG4E] == * direction: ** LEFT-TO-RIGHT * common name: ** UDP N acetylglucosamine 4 epimerase...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SHK3Dr SHK3Dr] == * direction: ** REVERSIBLE * common name: ** Shikimate dehydrogenase * Synonym(s)...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/SHK3Dr SHK3Dr] == |
* direction: | * direction: | ||
| − | ** | + | ** REVERSIBLE |
* common name: | * common name: | ||
| − | ** | + | ** Shikimate dehydrogenase |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[nadph]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[3dhsk]][c] '''<=>''' 1.0 [[nadp]][c] '''+''' 1.0 [[skm]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 1.0 H+[c] '''+''' 1.0 3-Dehydroshikimate[c] '''<=>''' 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''+''' 1.0 Shikimate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * [[EF1561]] |
| − | ** [[pantograph]]-[[ | + | ** [[pantograph]]-[[l_plantarum_wcfs1]] |
| − | + | ** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]] | |
| − | ** [[pantograph]]-[[ | + | |
| − | + | ||
| − | + | ||
| − | + | ||
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]] | ** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]] | ||
== Pathways == | == Pathways == | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''460''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130] | ||
| + | ** '''135''' reactions found over '''694''' reactions in the full pathway | ||
| + | * [[map00400]]: [http://www.genome.jp/dbget-bin/www_bget?map00400 map00400] | ||
| + | ** '''13''' reactions found over '''59''' reactions in the full pathway | ||
| + | * [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110] | ||
| + | ** '''179''' reactions found over '''1054''' reactions in the full pathway | ||
| + | * [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230] | ||
| + | ** '''56''' reactions found over '''228''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* [[orthology]]: | * [[orthology]]: | ||
** [[pantograph]]: | ** [[pantograph]]: | ||
| + | *** [[e_coli_sstr_k12_substr_mg1655]] | ||
| + | *** [[l_plantarum_wcfs1]] | ||
*** [[b_subtilis_subsp_subtilis_str168]] | *** [[b_subtilis_subsp_subtilis_str168]] | ||
== External links == | == External links == | ||
| − | * MetaNetX (MNX) Equation : | + | * EC Number : 1.1.1.25 |
| − | {{#set: direction= | + | * BioCyc : META:SHIKIMATE-5-DEHYDROGENASE-RXN |
| − | {{#set: common name= | + | * MetaNetX (MNX) Equation : MNXR104378 |
| − | {{#set: gene associated= | + | * RHEA: |
| − | {{#set: in pathway=}} | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17737 17737] |
| + | * Reactome : REACT_R-MTU-964842 | ||
| + | * KEGG Reaction : R02413 | ||
| + | {{#set: direction=REVERSIBLE}} | ||
| + | {{#set: common name=Shikimate dehydrogenase}} | ||
| + | {{#set: gene associated=EF1561}} | ||
| + | {{#set: in pathway=map01100|map01130|map00400|map01110|map01230}} | ||
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
| − | {{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}} | + | {{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}} |
Revision as of 17:18, 10 January 2018
Contents
Reaction SHK3Dr
- direction:
- REVERSIBLE
- common name:
- Shikimate dehydrogenase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] + 1.0 H+[c] + 1.0 3-Dehydroshikimate[c] <=> 1.0 Nicotinamide adenine dinucleotide phosphate[c] + 1.0 Shikimate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
- map01100: map01100
- 460 reactions found over 2349 reactions in the full pathway
- map01130: map01130
- 135 reactions found over 694 reactions in the full pathway
- map00400: map00400
- 13 reactions found over 59 reactions in the full pathway
- map01110: map01110
- 179 reactions found over 1054 reactions in the full pathway
- map01230: map01230
- 56 reactions found over 228 reactions in the full pathway
Reconstruction information
External links
- EC Number : 1.1.1.25
- BioCyc : META:SHIKIMATE-5-DEHYDROGENASE-RXN
- MetaNetX (MNX) Equation : MNXR104378
- RHEA:
- Reactome : REACT_R-MTU-964842
- KEGG Reaction : R02413
