Difference between revisions of "NDPK6"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SHK3Dr SHK3Dr] == * direction: ** REVERSIBLE * common name: ** Shikimate dehydrogenase * Synonym(s)...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ALDD20x_1 ALDD20x_1] == * direction: ** LEFT-TO-RIGHT * common name: ** Aldehyde dehydrogenase NAD...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/SHK3Dr SHK3Dr] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ALDD20x_1 ALDD20x_1] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Shikimate dehydrogenase
+
** Aldehyde dehydrogenase NAD
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[nadph]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[3dhsk]][c] '''<=>''' 1.0 [[nadp]][c] '''+''' 1.0 [[skm]][c]
+
** 1.0 [[nad]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[imzacd]][c] '''=>''' 2.0 [[h]][c] '''+''' 1.0 [[imzac]][c] '''+''' 1.0 [[nadh]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 1.0 H+[c] '''+''' 1.0 3-Dehydroshikimate[c] '''<=>''' 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''+''' 1.0 Shikimate[c]
+
** 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 Imidazole 4 acetaldehyde C5H7N2O[c] '''=>''' 2.0 H+[c] '''+''' 1.0 Imidazole 4 acetate C5H6N2O2[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1561]]
+
* [[EF0253]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''135''' reactions found over '''694''' reactions in the full pathway
 
−
* [[map00400]]: [http://www.genome.jp/dbget-bin/www_bget?map00400 map00400]
 
−
** '''13''' reactions found over '''59''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''179''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 
−
** '''56''' reactions found over '''228''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
−
*** [[l_plantarum_wcfs1]]
+
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
 
== External links  ==
 
== External links  ==
−
* EC Number : 1.1.1.25
 
−
* BioCyc : META:SHIKIMATE-5-DEHYDROGENASE-RXN
 
−
* MetaNetX (MNX) Equation : MNXR104378
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17737 17737]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31059 31059]
−
* Reactome : REACT_R-MTU-964842
+
* BioCyc : META:RXN-10089
−
* KEGG Reaction : R02413
+
* MetaNetX (MNX) Equation : MNXR95745
−
{{#set: direction=REVERSIBLE}}
+
* KEGG Reaction : R04065
−
{{#set: common name=Shikimate dehydrogenase}}
+
* EC Number : 1.2.1.3
−
{{#set: gene associated=EF1561}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: in pathway=map01100|map01130|map00400|map01110|map01230}}
+
{{#set: common name=Aldehyde dehydrogenase NAD }}
 +
{{#set: gene associated=EF0253}}
 +
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
 

Revision as of 19:46, 18 March 2018

Reaction ALDD20x_1

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Aldehyde dehydrogenase NAD
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Nicotinamide adenine dinucleotide[c] + 1.0 H2O H2O[c] + 1.0 Imidazole 4 acetaldehyde C5H7N2O[c] => 2.0 H+[c] + 1.0 Imidazole 4 acetate C5H6N2O2[c] + 1.0 Nicotinamide adenine dinucleotide - reduced[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:RXN-10089
  • MetaNetX (MNX) Equation : MNXR95745
  • KEGG Reaction : R04065
  • EC Number : 1.2.1.3




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