Difference between revisions of "NO3abc"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PHEt2r PHEt2r] == * direction: ** REVERSIBLE * common name: ** L phenylalanine reversible transport...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NO3abc NO3abc] == * direction: ** LEFT-TO-RIGHT * common name: ** nitrate transport via ABC system...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/PHEt2r PHEt2r] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/NO3abc NO3abc] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** L phenylalanine reversible transport via proton symport
+
** nitrate transport via ABC system
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h]][e] '''+''' 1.0 [[phe__L]][e] '''<=>''' 1.0 [[phe__L]][c] '''+''' 1.0 [[h]][c]
+
** 1.0 [[no3]][e] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[pi]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[no3]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 H+[e] '''+''' 1.0 L-Phenylalanine[e] '''<=>''' 1.0 L-Phenylalanine[c] '''+''' 1.0 H+[c]
+
** 1.0 Nitrate[e] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Phosphate[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 Nitrate[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF1103]]
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* Gene: [[EF1053]]
** 2_reaction_to_add_delete
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** Source: [[orthology-l_plantarum_wcfs1]]
 +
* Gene: [[EF1054]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
* Category: [[manual]]
 
* Category: [[manual]]
** Source: [[manual-2_reaction_to_add_delete]]
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** Source: [[manual-curation_from_orthology]]
*** Comment: [[this was a reaction occurring in the perisplasm of e. coli]]
+
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28923 28923]
+
{{#set: common name=nitrate transport via ABC system}}
* MetaNetX (MNX) Equation : MNXR102635
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{{#set: gene associated=EF1053|EF1054}}
* BioCyc : META:TRANS-RXN-56
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=L phenylalanine reversible transport via proton symport}}
+
{{#set: gene associated=EF1103}}
+
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=orthology|manual}}
{{#set: reconstruction source=manual-2_reaction_to_add_delete}}
+
{{#set: reconstruction source=manual-curation_from_orthology|orthology-l_plantarum_wcfs1}}
{{#set: reconstruction comment=this was a reaction occurring in the perisplasm of e. coli}}
+
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:31, 21 March 2018

Reaction NO3abc

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • nitrate transport via ABC system
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Nitrate[e] + 1.0 ATP C10H12N5O13P3[c] + 1.0 H2O H2O[c] => 1.0 Phosphate[c] + 1.0 ADP C10H12N5O10P2[c] + 1.0 Nitrate[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links