Difference between revisions of "NTD4"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ATPS3r ATPS3r] == * direction: ** REVERSIBLE * common name: ** ATP synthase three protons for one A...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CMPDAi CMPDAi] == * direction: ** LEFT-TO-RIGHT * common name: ** CMP deaminase * Synonym(s): == R...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/ATPS3r ATPS3r] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/CMPDAi CMPDAi] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** ATP synthase three protons for one ATP
+
** CMP deaminase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 3.0 [[h]][e] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[adp]][c] '''<=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[atp]][c] '''+''' 2.0 [[h]][c]
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** 1.0 [[h2o]][c] '''+''' 1.0 [[cmp]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[nh4]][c] '''+''' 1.0 [[ump]][c]
 
* With common name(s):
 
* With common name(s):
** 3.0 H+[e] '''+''' 1.0 Phosphate[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''<=>''' 1.0 H2O H2O[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 2.0 H+[c]
+
** 1.0 H2O H2O[c] '''+''' 1.0 CMP C9H12N3O8P[c] '''+''' 1.0 H+[c] '''=>''' 1.0 Ammonium[c] '''+''' 1.0 UMP C9H11N2O9P[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF2612]]
+
* [[EF2448]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
* [[EF2613]]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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* [[EF2607]]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
+
* [[EF2609]]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
+
* [[EF2610]]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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* [[EF2614]]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
+
* [[EF2608]]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
+
* [[EF2611]]
+
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
** '''82''' reactions found over '''244''' reactions in the full pathway
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
*** [[l_plantarum_wcfs1]]
+
*** [[b_subtilis_subsp_subtilis_str168]]
 
== External links  ==
 
== External links  ==
{{#set: direction=REVERSIBLE}}
+
* MetaNetX (MNX) Equation : MNXR96803
{{#set: common name=ATP synthase three protons for one ATP }}
+
* EC Number : 3.5.4.12
{{#set: gene associated=EF2612|EF2613|EF2607|EF2609|EF2610|EF2614|EF2608|EF2611}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: in pathway=}}
+
{{#set: common name=CMP deaminase}}
 +
{{#set: gene associated=EF2448}}
 +
{{#set: in pathway=map00240|map01100}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=l_plantarum_wcfs1}}
+
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}

Revision as of 17:13, 10 January 2018

Reaction CMPDAi

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • CMP deaminase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O H2O[c] + 1.0 CMP C9H12N3O8P[c] + 1.0 H+[c] => 1.0 Ammonium[c] + 1.0 UMP C9H11N2O9P[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR96803
  • EC Number : 3.5.4.12