Difference between revisions of "NTD4"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PPTHppc PPTHppc] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With iden...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NTD4 NTD4] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-nucleotidase (CMP) * Synonym(s):...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/PPTHppc PPTHppc] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/NTD4 NTD4] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** 5'-nucleotidase (CMP)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h2o]][c] '''+''' 1.0 [[ppt]][c] '''=>''' 1.0 [[h2]][c] '''+''' 1.0 [[pi]][c]
+
** 1.0 [[h2o]][c] '''+''' 1.0 [[cmp]][c] '''=>''' 1.0 [[cytd]][c] '''+''' 1.0 [[pi]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 H2O H2O[c] '''+''' 1.0 Phosphonate[c] '''=>''' 1.0 Hydrogen[c] '''+''' 1.0 Phosphate[c]
+
** 1.0 H2O H2O[c] '''+''' 1.0 CMP C9H12N3O8P[c] '''=>''' 1.0 Cytidine[c] '''+''' 1.0 Phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF2973]]
+
* Gene: [[EF0062]]
** 1_new_rxn_for_biomass
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
** '''82''' reactions found over '''244''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[manual]]
+
* Category: [[orthology]]
** Source: [[manual-1_new_rxn_for_biomass]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
*** Comment: [[this was a reaction occurring in the perisplasm of e. coli]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29367 29367]
 +
* BioCyc : META:RXN-14026
 +
* MetaNetX (MNX) Equation : MNXR102034
 +
* KEGG Reaction : R00511
 +
* EC Number : 3.1.3.5
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: gene associated=EF2973}}
+
{{#set: common name=5'-nucleotidase (CMP)}}
{{#set: in pathway=}}
+
{{#set: gene associated=EF0062}}
{{#set: reconstruction category=manual}}
+
{{#set: in pathway=map00240}}
{{#set: reconstruction source=manual-1_new_rxn_for_biomass}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction comment=this was a reaction occurring in the perisplasm of e. coli}}
+
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:40, 21 March 2018

Reaction NTD4

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 5'-nucleotidase (CMP)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O H2O[c] + 1.0 CMP C9H12N3O8P[c] => 1.0 Cytidine[c] + 1.0 Phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:RXN-14026
  • MetaNetX (MNX) Equation : MNXR102034
  • KEGG Reaction : R00511
  • EC Number : 3.1.3.5