Difference between revisions of "ORPT"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/BG_MBDG BG_MBDG] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta glucosidase * Synonym(s):...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ORPT ORPT] == * direction: ** REVERSIBLE * common name: ** Orotate phosphoribosyltransferase * Syno...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/BG_MBDG BG_MBDG] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ORPT ORPT] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
** Beta glucosidase
+
** Orotate phosphoribosyltransferase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[mbdg]][e] '''+''' 1.0 [[h2o]][e] '''=>''' 1.0 [[meoh]][e] '''+''' 1.0 [[glc__D]][e]
+
** 1.0 [[orot5p]][c] '''+''' 1.0 [[ppi]][c] '''<=>''' 1.0 [[orot]][c] '''+''' 1.0 [[prpp]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Beta Methylglucoside C7H14O6[e] '''+''' 1.0 H2O H2O[e] '''=>''' 1.0 Methanol[e] '''+''' 1.0 D-Glucose[e]
+
** 1.0 Orotidine 5'-phosphate[c] '''+''' 1.0 Diphosphate[c] '''<=>''' 1.0 Orotate C5H3N2O4[c] '''+''' 1.0 5-Phospho-alpha-D-ribose 1-diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF0271]]
+
* Gene: [[EF1712]]
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
** '''82''' reactions found over '''244''' reactions in the full pathway
 +
* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
 +
** '''22''' reactions found over '''72''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
*** [[b_subtilis_subsp_subtilis_str168]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* MetaNetX (MNX) Equation : MNXR96248
+
* EC Number : 2.4.2.10
* EC Number : 3.2.1.21
+
* BioCyc : META:OROPRIBTRANS-RXN
{{#set: direction=LEFT-TO-RIGHT}}
+
* MetaNetX (MNX) Equation : MNXR102231
{{#set: common name=Beta glucosidase}}
+
* RHEA:
{{#set: gene associated=EF0271}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10380 10380]
{{#set: in pathway=}}
+
* Reactome : REACT_R-ATH-73567
 +
* KEGG Reaction : R01870
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Orotate phosphoribosyltransferase}}
 +
{{#set: gene associated=EF1712}}
 +
{{#set: in pathway=map01100|map00240|map00983}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
 

Latest revision as of 16:06, 21 March 2018

Reaction ORPT

  • direction:
    • REVERSIBLE
  • common name:
    • Orotate phosphoribosyltransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Orotidine 5'-phosphate[c] + 1.0 Diphosphate[c] <=> 1.0 Orotate C5H3N2O4[c] + 1.0 5-Phospho-alpha-D-ribose 1-diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 2.4.2.10
  • BioCyc : META:OROPRIBTRANS-RXN
  • MetaNetX (MNX) Equation : MNXR102231
  • RHEA:
  • Reactome : REACT_R-ATH-73567
  • KEGG Reaction : R01870