Difference between revisions of "P5CR"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/4ahmmp 4ahmmp] == * common name: ** 4-Amino-5-hydroxymethyl-2-methylpyrimidine * Synonym(s):...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MECDPS MECDPS] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-C-methyl-D-erythritol 2,4-cyclo...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/MECDPS MECDPS] == |
| + | * direction: | ||
| + | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
* Synonym(s): | * Synonym(s): | ||
| − | == Reaction(s) | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | == | + | ** 1.0 [[2p4c2me]][c] '''=>''' 1.0 [[2mecdp]][c] '''+''' 1.0 [[cmp]][c] |
| − | * [[ | + | * With common name(s): |
| − | * [[ | + | ** 1.0 2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol[c] '''=>''' 1.0 2-C-methyl-D-erythritol 2,4-cyclodiphosphate[c] '''+''' 1.0 CMP C9H12N3O8P[c] |
| − | == | + | |
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * [[EF0042]] | ||
| + | ** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]] | ||
| + | ** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]] | ||
| + | == Pathways == | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''460''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130] | ||
| + | ** '''135''' reactions found over '''694''' reactions in the full pathway | ||
| + | * [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110] | ||
| + | ** '''179''' reactions found over '''1054''' reactions in the full pathway | ||
| + | * [[map00900]]: [http://www.genome.jp/dbget-bin/www_bget?map00900 map00900] | ||
| + | ** '''14''' reactions found over '''67''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | {{#set: common name= | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23864 23864] |
| − | {{#set: | + | * BioCyc : META:RXN0-302 |
| + | * MetaNetX (MNX) Equation : MNXR101424 | ||
| + | * KEGG Reaction : R05637 | ||
| + | * EC Number : 4.6.1.12 | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase}} | ||
| + | {{#set: gene associated=EF0042}} | ||
| + | {{#set: in pathway=map01100|map01130|map01110|map00900}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Revision as of 19:38, 18 March 2018
Contents
Reaction MECDPS
- direction:
- LEFT-TO-RIGHT
- common name:
- 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol[c] => 1.0 2-C-methyl-D-erythritol 2,4-cyclodiphosphate[c] + 1.0 CMP C9H12N3O8P[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
- map01100: map01100
- 460 reactions found over 2349 reactions in the full pathway
- map01130: map01130
- 135 reactions found over 694 reactions in the full pathway
- map01110: map01110
- 179 reactions found over 1054 reactions in the full pathway
- map00900: map00900
- 14 reactions found over 67 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-e_coli_sstr_k12_substr_mg1655
- Tool: pantograph
- Source: orthology-b_subtilis_subsp_subtilis_str168
- Tool: pantograph
- Source: orthology-e_coli_sstr_k12_substr_mg1655
External links
- RHEA:
- BioCyc : META:RXN0-302
- MetaNetX (MNX) Equation : MNXR101424
- KEGG Reaction : R05637
- EC Number : 4.6.1.12
