Difference between revisions of "PHETRS"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/3OAS80 3OAS80] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-[acyl-carrier-protein]...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PHETRS PHETRS] == * direction: ** LEFT-TO-RIGHT * common name: ** Phenylalanyl-tRNA synthetase * Sy...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/3OAS80 3OAS80] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PHETRS PHETRS] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 3-oxoacyl-[acyl-carrier-protein] synthase (n-C8:0)
+
** Phenylalanyl-tRNA synthetase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[hexACP]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[malACP]][c] '''=>''' 1.0 [[3ooctACP]][c] '''+''' 1.0 [[co2]][c] '''+''' 1.0 [[ACP]][c]
+
** 1.0 [[phe__L]][c] '''+''' 1.0 [[trnaphe]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[ppi]][c] '''+''' 1.0 [[amp]][c] '''+''' 1.0 [[phetrna]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Hexanoyl-ACP (n-C6:0ACP)[c] '''+''' 1.0 H+[c] '''+''' 1.0 Malonyl-[acyl-carrier protein][c] '''=>''' 1.0 3-Oxooctanoyl-[acyl-carrier protein][c] '''+''' 1.0 CO2 CO2[c] '''+''' 1.0 Acyl carrier protein[c]
+
** 1.0 L-Phenylalanine[c] '''+''' 1.0 TRNA(Phe)[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 Diphosphate[c] '''+''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 L-Phenylalanyl-tRNA(Phe)[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF0283]]
+
* Gene: [[EF1116]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
* [[EF2880]]
+
* Gene: [[EF1115]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
+
* [[map00970]]: [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970]
−
** '''460''' reactions found over '''2349''' reactions in the full pathway
+
** '''23''' reactions found over '''49''' reactions in the full pathway
−
* [[map01212]]: [http://www.genome.jp/dbget-bin/www_bget?map01212 map01212]
+
−
** '''36''' reactions found over '''182''' reactions in the full pathway
+
−
* [[map00061]]: [http://www.genome.jp/dbget-bin/www_bget?map00061 map00061]
+
−
** '''65''' reactions found over '''160''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
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*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR94964
+
* Reactome : REACT_R-HSA-379848
−
* EC Number : 2.3.1.86
+
* MetaNetX (MNX) Equation : MNXR102634
 +
* KEGG Reaction : R03660
 +
* EC Number : 6.1.1.20
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase (n-C8:0)}}
+
{{#set: common name=Phenylalanyl-tRNA synthetase}}
−
{{#set: gene associated=EF0283|EF2880}}
+
{{#set: gene associated=EF1116|EF1115}}
−
{{#set: in pathway=map01100|map01212|map00061}}
+
{{#set: in pathway=map00970}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:31, 21 March 2018

Reaction PHETRS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phenylalanyl-tRNA synthetase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Phenylalanine[c] + 1.0 TRNA(Phe)[c] + 1.0 ATP C10H12N5O13P3[c] => 1.0 Diphosphate[c] + 1.0 AMP C10H12N5O7P[c] + 1.0 L-Phenylalanyl-tRNA(Phe)[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • Reactome : REACT_R-HSA-379848
  • MetaNetX (MNX) Equation : MNXR102634
  • KEGG Reaction : R03660
  • EC Number : 6.1.1.20




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