Difference between revisions of "PNP"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NOX NOX] == * direction: ** LEFT-TO-RIGHT * common name: ** NADH oxidase * Synonym(s): == Reaction...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SELCYSS SELCYSS] == * direction: ** LEFT-TO-RIGHT * common name: ** Selenocysteine synthase * Synon...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/SELCYSS SELCYSS] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Selenocysteine synthase |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[sertrna_sec]][c] '''+''' 1.0 [[selnp]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[sectrna]][c] '''+''' 1.0 [[pi]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 L-Seryl-tRNA(Sec)[c] '''+''' 1.0 Selenophosphate[c] '''=>''' 1.0 H+[c] '''+''' 1.0 L-Selenocysteinyl-tRNA(Sec)[c] '''+''' 1.0 Phosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * [[EF0838]] |
| − | ** [[pantograph]]-[[ | + | ** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]] |
| − | * [[ | + | * [[EF2976]] |
| − | ** [[pantograph]]-[[ | + | ** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]] |
== Pathways == | == Pathways == | ||
| + | * [[map00450]]: [http://www.genome.jp/dbget-bin/www_bget?map00450 map00450] | ||
| + | ** '''6''' reactions found over '''35''' reactions in the full pathway | ||
| + | * [[map00970]]: [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970] | ||
| + | ** '''23''' reactions found over '''49''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]] | + | * Category: [[orthology]] |
| − | ** [[ | + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
== External links == | == External links == | ||
| − | + | * MetaNetX (MNX) Equation : MNXR104314 | |
| − | + | * KEGG Reaction : R08219 | |
| − | + | * EC Number : 2.9.1.1 | |
| − | * MetaNetX (MNX) Equation : | + | |
| − | * KEGG Reaction : | + | |
| − | * EC Number : | + | |
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=Selenocysteine synthase}} |
| − | {{#set: gene associated= | + | {{#set: gene associated=EF0838|EF2976}} |
| − | {{#set: in pathway=}} | + | {{#set: in pathway=map00450|map00970}} |
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
| − | |||
Revision as of 19:45, 18 March 2018
Contents
Reaction SELCYSS
- direction:
- LEFT-TO-RIGHT
- common name:
- Selenocysteine synthase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1.0 sertrna_sec[c] + 1.0 selnp[c] => 1.0 h[c] + 1.0 sectrna[c] + 1.0 pi[c]
- With common name(s):
- 1.0 L-Seryl-tRNA(Sec)[c] + 1.0 Selenophosphate[c] => 1.0 H+[c] + 1.0 L-Selenocysteinyl-tRNA(Sec)[c] + 1.0 Phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
- map00450: map00450
- 6 reactions found over 35 reactions in the full pathway
- map00970: map00970
- 23 reactions found over 49 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-e_coli_sstr_k12_substr_mg1655
- Tool: pantograph
- Source: orthology-e_coli_sstr_k12_substr_mg1655
External links
- MetaNetX (MNX) Equation : MNXR104314
- KEGG Reaction : R08219
- EC Number : 2.9.1.1
