Difference between revisions of "PRAGSr"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ADPDS_manual ADPDS_manual] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == *...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PRAGSr PRAGSr] == * direction: ** REVERSIBLE * common name: ** Phosphoribosylglycinamide synthase *...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/PRAGSr PRAGSr] == |
* direction: | * direction: | ||
| − | ** | + | ** REVERSIBLE |
| + | * common name: | ||
| + | ** Phosphoribosylglycinamide synthase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[atp]][c] '''+''' 1.0 [[gly]][c] '''+''' 1.0 [[pram]][c] '''<=>''' 1.0 [[pi]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[gar]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Glycine[c] '''+''' 1.0 5-Phospho-beta-D-ribosylamine[c] '''<=>''' 1.0 Phosphate[c] '''+''' 1.0 H+[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 N1-(5-Phospho-D-ribosyl)glycinamide[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[EF1777]] |
| − | ** | + | ** Source: [[orthology-l_plantarum_wcfs1]] |
| + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] | ||
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
== Pathways == | == Pathways == | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''460''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130] | ||
| + | ** '''135''' reactions found over '''694''' reactions in the full pathway | ||
| + | * [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110] | ||
| + | ** '''179''' reactions found over '''1054''' reactions in the full pathway | ||
| + | * [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230] | ||
| + | ** '''97''' reactions found over '''298''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * Category: [[ | + | * Category: [[orthology]] |
| − | ** Source: [[ | + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] |
| − | *** | + | *** Tool: [[pantograph]] |
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | {{#set: direction= | + | * BioCyc : META:GLYRIBONUCSYN-RXN |
| − | {{#set: gene associated= | + | * MetaNetX (MNX) Equation : MNXR103139 |
| − | {{#set: in pathway=}} | + | * KEGG Reaction : R04144 |
| − | {{#set: reconstruction category= | + | * EC Number : 6.3.4.13 |
| − | {{#set: reconstruction source= | + | {{#set: direction=REVERSIBLE}} |
| − | {{#set: reconstruction | + | {{#set: common name=Phosphoribosylglycinamide synthase}} |
| + | {{#set: gene associated=EF1777}} | ||
| + | {{#set: in pathway=map01100|map01130|map01110|map00230}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 16:37, 21 March 2018
Contents
Reaction PRAGSr
- direction:
- REVERSIBLE
- common name:
- Phosphoribosylglycinamide synthase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 ATP C10H12N5O13P3[c] + 1.0 Glycine[c] + 1.0 5-Phospho-beta-D-ribosylamine[c] <=> 1.0 Phosphate[c] + 1.0 H+[c] + 1.0 ADP C10H12N5O10P2[c] + 1.0 N1-(5-Phospho-D-ribosyl)glycinamide[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: EF1777
Pathways
- map01100: map01100
- 460 reactions found over 2349 reactions in the full pathway
- map01130: map01130
- 135 reactions found over 694 reactions in the full pathway
- map01110: map01110
- 179 reactions found over 1054 reactions in the full pathway
- map00230: map00230
- 97 reactions found over 298 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-e_coli_sstr_k12_substr_mg1655
- Tool: pantograph
- Source: orthology-b_subtilis_subsp_subtilis_str168
- Tool: pantograph
- Source: orthology-l_plantarum_wcfs1
- Tool: pantograph
- Source: orthology-e_coli_sstr_k12_substr_mg1655
External links
- BioCyc : META:GLYRIBONUCSYN-RXN
- MetaNetX (MNX) Equation : MNXR103139
- KEGG Reaction : R04144
- EC Number : 6.3.4.13
