Difference between revisions of "PUNP7"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RNDR1 RNDR1] == * direction: ** LEFT-TO-RIGHT * common name: ** Ribonucleoside-diphosphate reductas...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PUNP7 PUNP7] == * direction: ** REVERSIBLE * common name: ** Purine-nucleoside phosphorylase (Xanth...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/RNDR1 RNDR1] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PUNP7 PUNP7] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Ribonucleoside-diphosphate reductase (ADP)
+
** Purine-nucleoside phosphorylase (Xanthosine)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[adp]][c] '''+''' 1.0 [[trdrd]][c] '''=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[trdox]][c] '''+''' 1.0 [[dadp]][c]
+
** 1.0 [[pi]][c] '''+''' 1.0 [[xtsn]][c] '''<=>''' 1.0 [[r1p]][c] '''+''' 1.0 [[xan]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 Reduced thioredoxin[c] '''=>''' 1.0 H2O H2O[c] '''+''' 1.0 Oxidized thioredoxin[c] '''+''' 1.0 DADP C10H12N5O9P2[c]
+
** 1.0 Phosphate[c] '''+''' 1.0 Xanthosine[c] '''<=>''' 1.0 Alpha-D-Ribose 1-phosphate[c] '''+''' 1.0 Xanthine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF0472]]
+
* Gene: [[EF0186]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
* [[EF0470]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
* Gene: [[EF0187]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
−
* [[EF0471]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
 
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
** '''82''' reactions found over '''244''' reactions in the full pathway
 
** '''82''' reactions found over '''244''' reactions in the full pathway
−
* [[map00480]]: [http://www.genome.jp/dbget-bin/www_bget?map00480 map00480]
+
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''10''' reactions found over '''39''' reactions in the full pathway
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
** '''97''' reactions found over '''298''' reactions in the full pathway
 
** '''97''' reactions found over '''298''' reactions in the full pathway
 +
* [[map00760]]: [http://www.genome.jp/dbget-bin/www_bget?map00760 map00760]
 +
** '''19''' reactions found over '''97''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** Tool: [[pantograph]]
 
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
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*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* BioCyc : META:ADPREDUCT-RXN
+
* RHEA:
−
* MetaNetX (MNX) Equation : MNXR104060
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27638 27638]
−
* KEGG Reaction : R02017
+
* BioCyc : META:XANTHOSINEPHOSPHORY-RXN
−
* EC Number : 1.17.4.1
+
* MetaNetX (MNX) Equation : MNXR103349
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* KEGG Reaction : R02297
−
{{#set: common name=Ribonucleoside-diphosphate reductase (ADP)}}
+
* EC Number : 2.4.2.-
−
{{#set: gene associated=EF0472|EF0470|EF0471}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: in pathway=map01100|map00240|map00480|map00230}}
+
{{#set: common name=Purine-nucleoside phosphorylase (Xanthosine)}}
 +
{{#set: gene associated=EF0186|EF0187}}
 +
{{#set: in pathway=map00240|map01100|map01110|map00230|map00760}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
+
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:33, 21 March 2018

Reaction PUNP7

  • direction:
    • REVERSIBLE
  • common name:
    • Purine-nucleoside phosphorylase (Xanthosine)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Phosphate[c] + 1.0 Xanthosine[c] <=> 1.0 Alpha-D-Ribose 1-phosphate[c] + 1.0 Xanthine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:XANTHOSINEPHOSPHORY-RXN
  • MetaNetX (MNX) Equation : MNXR103349
  • KEGG Reaction : R02297
  • EC Number : 2.4.2.-




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