Difference between revisions of "RPI"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GUAt2r GUAt2r] == * direction: ** REVERSIBLE * common name: ** Guanine reversible transport via pro...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RPI RPI] == * direction: ** REVERSIBLE * common name: ** Ribose-5-phosphate isomerase * Synonym(s):...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/RPI RPI] == |
* direction: | * direction: | ||
** REVERSIBLE | ** REVERSIBLE | ||
* common name: | * common name: | ||
| − | ** | + | ** Ribose-5-phosphate isomerase |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[r5p]][c] '''<=>''' 1.0 [[ru5p__D]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 Alpha-D-Ribose 5-phosphate[c] '''<=>''' 1.0 D-Ribulose 5-phosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[EF0197]] |
| − | ** [[ | + | ** Source: [[orthology-l_plantarum_wcfs1]] |
| − | ** [[ | + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] |
| − | * [[ | + | * Gene: [[EF1835]] |
| − | * | + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] |
| + | * Gene: [[EF1834]] | ||
| + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] | ||
== Pathways == | == Pathways == | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''460''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110] | ||
| + | ** '''179''' reactions found over '''1054''' reactions in the full pathway | ||
| + | * [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120] | ||
| + | ** '''104''' reactions found over '''715''' reactions in the full pathway | ||
| + | * [[map00051]]: [http://www.genome.jp/dbget-bin/www_bget?map00051 map00051] | ||
| + | ** '''22''' reactions found over '''63''' reactions in the full pathway | ||
| + | * [[map00710]]: [http://www.genome.jp/dbget-bin/www_bget?map00710 map00710] | ||
| + | ** '''16''' reactions found over '''71''' reactions in the full pathway | ||
| + | * [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130] | ||
| + | ** '''135''' reactions found over '''694''' reactions in the full pathway | ||
| + | * [[map00030]]: [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030] | ||
| + | ** '''26''' reactions found over '''69''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] | ||
| + | *** Tool: [[pantograph]] | ||
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
| Line 28: | Line 46: | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | * MetaNetX (MNX) Equation : | + | * MetaNetX (MNX) Equation : MNXR104084 |
| + | * EC Number : 5.3.1.6 | ||
{{#set: direction=REVERSIBLE}} | {{#set: direction=REVERSIBLE}} | ||
| − | {{#set: common name= | + | {{#set: common name=Ribose-5-phosphate isomerase}} |
| − | {{#set: gene associated= | + | {{#set: gene associated=EF0197|EF1835|EF1834}} |
| − | {{#set: in pathway=}} | + | {{#set: in pathway=map01100|map01110|map01120|map00051|map00710|map01130|map00030}} |
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
| − | {{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}} | + | {{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}} |
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 16:42, 21 March 2018
Contents
Reaction RPI
- direction:
- REVERSIBLE
- common name:
- Ribose-5-phosphate isomerase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 Alpha-D-Ribose 5-phosphate[c] <=> 1.0 D-Ribulose 5-phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: EF0197
- Source: orthology-l_plantarum_wcfs1
- Source: orthology-e_coli_sstr_k12_substr_mg1655
- Gene: EF1835
- Gene: EF1834
Pathways
- map01100: map01100
- 460 reactions found over 2349 reactions in the full pathway
- map01110: map01110
- 179 reactions found over 1054 reactions in the full pathway
- map01120: map01120
- 104 reactions found over 715 reactions in the full pathway
- map00051: map00051
- 22 reactions found over 63 reactions in the full pathway
- map00710: map00710
- 16 reactions found over 71 reactions in the full pathway
- map01130: map01130
- 135 reactions found over 694 reactions in the full pathway
- map00030: map00030
- 26 reactions found over 69 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-e_coli_sstr_k12_substr_mg1655
- Tool: pantograph
- Source: orthology-b_subtilis_subsp_subtilis_str168
- Tool: pantograph
- Source: orthology-l_plantarum_wcfs1
- Tool: pantograph
- Source: orthology-e_coli_sstr_k12_substr_mg1655
External links
- MetaNetX (MNX) Equation : MNXR104084
- EC Number : 5.3.1.6
