Difference between revisions of "SPMDt3"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NMNN NMNN] == * direction: ** LEFT-TO-RIGHT * common name: ** NMN nucleosidase * Synonym(s): == Re...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SPMDt3 SPMDt3] == * direction: ** LEFT-TO-RIGHT * common name: ** Spermidine transport out via prot...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/NMNN NMNN] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/SPMDt3 SPMDt3] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** NMN nucleosidase
+
** Spermidine transport out via proton antiport
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h2o]][c] '''+''' 1.0 [[nmn]][c] '''=>''' 1.0 [[r5p]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[ncam]][c]
+
** 1.0 [[h]][e] '''+''' 1.0 [[spmd]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[spmd]][e]
 
* With common name(s):
 
* With common name(s):
** 1.0 H2O H2O[c] '''+''' 1.0 NMN C11H14N2O8P[c] '''=>''' 1.0 Alpha-D-Ribose 5-phosphate[c] '''+''' 1.0 H+[c] '''+''' 1.0 Nicotinamide[c]
+
** 1.0 H+[e] '''+''' 1.0 Spermidine[c] '''=>''' 1.0 H+[c] '''+''' 1.0 Spermidine[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[EF1078]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
* [[map00760]]: [http://www.genome.jp/dbget-bin/www_bget?map00760 map00760]
 
** '''25''' reactions found over '''97''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[gap-filling]]:
+
* Category: [[orthology]]
** [[meneco]]:
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
*** [[added for gapfilling]]
+
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-curation_from_orthology]]
 
== External links  ==
 
== External links  ==
* MetaNetX (MNX) Equation : MNXR101971
 
* EC Number : 3.2.2.14
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=NMN nucleosidase}}
+
{{#set: common name=Spermidine transport out via proton antiport}}
{{#set: in pathway=map00760}}
+
{{#set: gene associated=EF1078}}
{{#set: reconstruction category=gap-filling}}
+
{{#set: in pathway=}}
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction category=orthology|manual}}
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: reconstruction source=manual-curation_from_orthology|orthology-b_subtilis_subsp_subtilis_str168}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:46, 21 March 2018

Reaction SPMDt3

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Spermidine transport out via proton antiport
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H+[e] + 1.0 Spermidine[c] => 1.0 H+[c] + 1.0 Spermidine[e]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links