Difference between revisions of "TKT1"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/I2FE2SR I2FE2SR] == * direction: ** LEFT-TO-RIGHT * common name: ** ISC [2Fe-2S] regeneration * Syn...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TKT1 TKT1] == * direction: ** REVERSIBLE * common name: ** Transketolase * Synonym(s): == Reaction...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/I2FE2SR I2FE2SR] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/TKT1 TKT1] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** ISC [2Fe-2S] regeneration
+
** Transketolase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[2fe1s]][c] '''+''' 1.0 [[iscssh]][c] '''+''' 1.0 [[iscu]][c] '''=>''' 1.0 [[iscu_2fe2s]][c] '''+''' 4.0 [[h]][c] '''+''' 1.0 [[iscs]][c]
+
** 1.0 [[r5p]][c] '''+''' 1.0 [[xu5p__D]][c] '''<=>''' 1.0 [[g3p]][c] '''+''' 1.0 [[s7p]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 [2Fe-1S] desulfurated iron-sulfur cluster[c] '''+''' 1.0 IscS with bound sulfur[c] '''+''' 1.0 IscU scaffold protein[c] '''=>''' 1.0 IscU with bound [2Fe-2S] cluster[c] '''+''' 4.0 H+[c] '''+''' 1.0 IscS sulfur acceptor protein[c]
+
** 1.0 Alpha-D-Ribose 5-phosphate[c] '''+''' 1.0 D-Xylulose 5-phosphate[c] '''<=>''' 1.0 Glyceraldehyde 3-phosphate[c] '''+''' 1.0 Sedoheptulose 7-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[EF0371]]
 
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
−
* [[EF2391]]
 
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
−
* [[EF2072]]
 
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''104''' reactions found over '''715''' reactions in the full pathway
 +
* [[map00710]]: [http://www.genome.jp/dbget-bin/www_bget?map00710 map00710]
 +
** '''16''' reactions found over '''71''' reactions in the full pathway
 +
* [[map01051]]: [http://www.genome.jp/dbget-bin/www_bget?map01051 map01051]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''135''' reactions found over '''694''' reactions in the full pathway
 +
* [[map00030]]: [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030]
 +
** '''26''' reactions found over '''69''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[gap-filling]]
−
** [[pantograph]]:
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR100766
+
* MetaNetX (MNX) Equation : MNXR104868
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* EC Number : 2.2.1.1
−
{{#set: common name=ISC [2Fe-2S] regeneration}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: gene associated=EF0371|EF2391|EF2072}}
+
{{#set: common name=Transketolase}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=map01100|map01110|map01120|map00710|map01051|map01130|map00030}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}
+
{{#set: reconstruction tool=meneco}}
 +
{{#set: reconstruction comment=added for gapfilling}}

Latest revision as of 16:37, 21 March 2018

Reaction TKT1

  • direction:
    • REVERSIBLE
  • common name:
    • Transketolase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Alpha-D-Ribose 5-phosphate[c] + 1.0 D-Xylulose 5-phosphate[c] <=> 1.0 Glyceraldehyde 3-phosphate[c] + 1.0 Sedoheptulose 7-phosphate[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR104868
  • EC Number : 2.2.1.1




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