Difference between revisions of "TMDK1"
From metabolic_network
(Created page with "Category:Gene == Gene EF1618 == * Synonym(s): == Reactions associated == * ETHAt6 ** pantograph-b_subtilis_subsp_subtilis_str168 == Pathways associated == ==...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TMDK1 TMDK1] == * direction: ** LEFT-TO-RIGHT * common name: ** Thymidine kinase (ATP:thymidine) *...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/TMDK1 TMDK1] == |
| + | * direction: | ||
| + | ** LEFT-TO-RIGHT | ||
| + | * common name: | ||
| + | ** Thymidine kinase (ATP:thymidine) | ||
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | ** [[ | + | ** 1.0 [[atp]][c] '''+''' 1.0 [[thymd]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[dtmp]][c] '''+''' 1.0 [[h]][c] |
| − | == Pathways | + | * With common name(s): |
| + | ** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Thymidine C10H14N2O5[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 DTMP C10H13N2O8P[c] '''+''' 1.0 H+[c] | ||
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[EF2555]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] | ||
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
| + | == Pathways == | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''460''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240] | ||
| + | ** '''82''' reactions found over '''244''' reactions in the full pathway | ||
| + | * [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983] | ||
| + | ** '''22''' reactions found over '''72''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * EC Number : 2.7.1.145 |
| + | * BioCyc : META:THYKI-RXN | ||
| + | * MetaNetX (MNX) Equation : MNXR104885 | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19129 19129] | ||
| + | * Reactome : REACT_R-ATH-73632 | ||
| + | * KEGG Reaction : R01567 | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=Thymidine kinase (ATP:thymidine)}} | ||
| + | {{#set: gene associated=EF2555}} | ||
| + | {{#set: in pathway=map01100|map00240|map00983}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 16:06, 21 March 2018
Contents
Reaction TMDK1
- direction:
- LEFT-TO-RIGHT
- common name:
- Thymidine kinase (ATP:thymidine)
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 ATP C10H12N5O13P3[c] + 1.0 Thymidine C10H14N2O5[c] => 1.0 ADP C10H12N5O10P2[c] + 1.0 DTMP C10H13N2O8P[c] + 1.0 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: EF2555
Pathways
- map01100: map01100
- 460 reactions found over 2349 reactions in the full pathway
- map00240: map00240
- 82 reactions found over 244 reactions in the full pathway
- map00983: map00983
- 22 reactions found over 72 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-e_coli_sstr_k12_substr_mg1655
- Tool: pantograph
- Source: orthology-b_subtilis_subsp_subtilis_str168
- Tool: pantograph
- Source: orthology-l_plantarum_wcfs1
- Tool: pantograph
- Source: orthology-e_coli_sstr_k12_substr_mg1655
External links
- EC Number : 2.7.1.145
- BioCyc : META:THYKI-RXN
- MetaNetX (MNX) Equation : MNXR104885
- RHEA:
- Reactome : REACT_R-ATH-73632
- KEGG Reaction : R01567
