Difference between revisions of "TransportSeed 4abz"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DMBZIDS2 DMBZIDS2] == * direction: ** LEFT-TO-RIGHT * common name: ** 5,6-dimethylbenzimidazole syn...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PGM_1 PGM_1] == * direction: ** REVERSIBLE * common name: ** phosphoglycerate mutase * Synonym(s):...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/DMBZIDS2 DMBZIDS2] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PGM_1 PGM_1] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
** 5,6-dimethylbenzimidazole synthase
+
** phosphoglycerate mutase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[o2]][c] '''+''' 1.0 [[nadh]][c] '''+''' 1.0 [[fmnh2]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[e4p]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[nad]][c] '''+''' 1.0 [[dmbzid]][c] '''+''' 1.0 [[dialurate]][c]
+
** 1.0 [[3pg]][c] '''<=>''' 1.0 [[2pg]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 O2 O2[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 Reduced FMN[c] '''+''' 1.0 H+[c] '''=>''' 1.0 D-Erythrose 4-phosphate[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 5,6-Dimethylbenzimidazole[c] '''+''' 1.0 Dialurate[c]
+
** 1.0 3-Phospho-D-glycerate[c] '''<=>''' 1.0 D-Glycerate 2-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[EF2433]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
* [[EF0195]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
* [[EF0273]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
* [[EF2664]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[gap-filling]]:
+
* [[orthology]]:
** [[meneco]]:
+
** [[pantograph]]:
*** [[added for gapfilling]]
+
*** [[l_plantarum_wcfs1]]
 +
* [[manual]]:
 +
** [[curation_from_orthology]]
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: direction=REVERSIBLE}}
{{#set: common name=5,6-dimethylbenzimidazole synthase}}
+
{{#set: common name=phosphoglycerate mutase}}
 +
{{#set: gene associated=EF2433|EF0195|EF0273|EF2664}}
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
{{#set: reconstruction category=gap-filling}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: reconstruction source=l_plantarum_wcfs1}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=curation_from_orthology}}

Revision as of 17:00, 10 January 2018

Reaction PGM_1

  • direction:
    • REVERSIBLE
  • common name:
    • phosphoglycerate mutase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 3-Phospho-D-glycerate[c] <=> 1.0 D-Glycerate 2-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links