Difference between revisions of "URACPAH"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CYSTGL CYSTGL] == * direction: ** LEFT-TO-RIGHT * common name: ** Cystathionine g lyase * Synonym(s...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/URACPAH URACPAH] == * direction: ** LEFT-TO-RIGHT * common name: ** Peroxyureidoacrylate hydrolase...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/CYSTGL CYSTGL] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/URACPAH URACPAH] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Cystathionine g lyase
+
** Peroxyureidoacrylate hydrolase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[cyst__L]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[nh4]][c] '''+''' 1.0 [[cys__L]][c] '''+''' 1.0 [[2obut]][c]
+
** 1.0 [[uracp]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[cbm]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[poaac]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 L-Cystathionine[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Ammonium[c] '''+''' 1.0 L-Cysteine[c] '''+''' 1.0 2-Oxobutanoate[c]
+
** 1.0 Ureidoacrylate peracid[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Carbamate[c] '''+''' 1.0 H+[c] '''+''' 1.0 Peroxyaminoacrylate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[EF0290]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
* [[EF0029]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
** '''82''' reactions found over '''244''' reactions in the full pathway
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[orthology]]
+
* Category: [[gap-filling]]
** Source: [[orthology-l_plantarum_wcfs1]]
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
*** Tool: [[pantograph]]
+
*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
* EC Number : 4.4.1.1
 
* BioCyc : META:RXN-15130
 
* MetaNetX (MNX) Equation : MNXR97012
 
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14005 14005]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31591 31591]
* Reactome : REACT_R-ATH-1614583
+
* EC Number : 3.5.1.110
* KEGG Reaction : R01001
+
* MetaNetX (MNX) Equation : MNXR105143
 +
* KEGG Reaction : R09947
 +
* BioCyc : META:RXN0-6460
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Cystathionine g lyase}}
+
{{#set: common name=Peroxyureidoacrylate hydrolase}}
{{#set: gene associated=EF0290|EF0029}}
+
{{#set: in pathway=map00240|map01100}}
{{#set: in pathway=}}
+
{{#set: reconstruction category=gap-filling}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
{{#set: reconstruction source=orthology-l_plantarum_wcfs1}}
+
{{#set: reconstruction tool=meneco}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction comment=added for gapfilling}}

Latest revision as of 16:25, 21 March 2018

Reaction URACPAH

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Peroxyureidoacrylate hydrolase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Ureidoacrylate peracid[c] + 1.0 H2O H2O[c] => 1.0 Carbamate[c] + 1.0 H+[c] + 1.0 Peroxyaminoacrylate[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 3.5.1.110
  • MetaNetX (MNX) Equation : MNXR105143
  • KEGG Reaction : R09947
  • BioCyc : META:RXN0-6460