Difference between revisions of "URAt2pp copy1"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DURIK1 DURIK1] == * direction: ** LEFT-TO-RIGHT * common name: ** Deoxyuridine kinase (ATP:Deoxyuri...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ADPRDP ADPRDP] == * direction: ** LEFT-TO-RIGHT * common name: ** ADPribose diphosphatase * Synonym...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/DURIK1 DURIK1] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ADPRDP ADPRDP] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Deoxyuridine kinase (ATP:Deoxyuridine)
+
** ADPribose diphosphatase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[duri]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[dump]][c]
+
** 1.0 [[adprib]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[amp]][c] '''+''' 2.0 [[h]][c] '''+''' 1.0 [[r5p]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Deoxyuridine[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c] '''+''' 1.0 DUMP C9H11N2O8P[c]
+
** 1.0 ADPribose C15H21N5O14P2[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 AMP C10H12N5O7P[c] '''+''' 2.0 H+[c] '''+''' 1.0 Alpha-D-Ribose 5-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF2555]]
+
* [[EF2696]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
+
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
−
** '''460''' reactions found over '''2349''' reactions in the full pathway
+
** '''97''' reactions found over '''298''' reactions in the full pathway
−
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
+
−
** '''82''' reactions found over '''244''' reactions in the full pathway
+
−
* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
+
−
** '''22''' reactions found over '''72''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
−
*** [[l_plantarum_wcfs1]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* MetaNetX (MNX) Equation : MNXR95480
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28206 28206]
+
* EC Number : 3.6.1.13
−
* BioCyc : META:DURIDKI-RXN
+
−
* MetaNetX (MNX) Equation : MNXR97817
+
−
* KEGG Reaction : R02099
+
−
* EC Number : 2.7.1.145
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Deoxyuridine kinase (ATP:Deoxyuridine)}}
+
{{#set: common name=ADPribose diphosphatase}}
−
{{#set: gene associated=EF2555}}
+
{{#set: gene associated=EF2696}}
−
{{#set: in pathway=map01100|map00240|map00983}}
+
{{#set: in pathway=map00230}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
 

Revision as of 19:44, 18 March 2018

Reaction ADPRDP

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ADPribose diphosphatase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ADPribose C15H21N5O14P2[c] + 1.0 H2O H2O[c] => 1.0 AMP C10H12N5O7P[c] + 2.0 H+[c] + 1.0 Alpha-D-Ribose 5-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR95480
  • EC Number : 3.6.1.13




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