Difference between revisions of "XAND"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PPGPPDP PPGPPDP] == * direction: ** LEFT-TO-RIGHT * common name: ** Guanosine-3',5'-bis(diphosphate...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/XAND XAND] == * direction: ** LEFT-TO-RIGHT * common name: ** Xanthine dehydrogenase * Synonym(s):...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/PPGPPDP PPGPPDP] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/XAND XAND] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
+
** Xanthine dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h2o]][c] '''+''' 1.0 [[ppgpp]][c] '''=>''' 1.0 [[ppi]][c] '''+''' 1.0 [[gdp]][c]
+
** 1.0 [[nad]][c] '''+''' 1.0 [[xan]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[urate]][c] '''+''' 1.0 [[nadh]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H2O H2O[c] '''+''' 1.0 Guanosine 3',5'-bis(diphosphate)[c] '''=>''' 1.0 Diphosphate[c] '''+''' 1.0 GDP C10H12N5O11P2[c]
+
** 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 Xanthine[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 H+[c] '''+''' 1.0 Urate C5H4N4O3[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1974]]
+
* Gene: [[EF2571]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* Gene: [[EF2570]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* Gene: [[EF2569]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
** '''97''' reactions found over '''298''' reactions in the full pathway
 
** '''97''' reactions found over '''298''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''104''' reactions found over '''715''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* EC Number : 1.17.1.4
 +
* BioCyc : META:RXN0-901
 +
* MetaNetX (MNX) Equation : MNXR105225
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14253 14253]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16669 16669]
−
* BioCyc : META:PPGPPSYN-RXN
+
* Reactome : REACT_R-GGA-421158
−
* MetaNetX (MNX) Equation : MNXR103109
+
* KEGG Reaction : R02103
−
* KEGG Reaction : R00336
+
−
* EC Number : 3.1.7.2
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Guanosine-3',5'-bis(diphosphate) 3'-diphosphatase}}
+
{{#set: common name=Xanthine dehydrogenase}}
−
{{#set: gene associated=EF1974}}
+
{{#set: gene associated=EF2571|EF2570|EF2569}}
−
{{#set: in pathway=map00230}}
+
{{#set: in pathway=map01100|map00230|map01120}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
+
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:37, 21 March 2018

Reaction XAND

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Xanthine dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Nicotinamide adenine dinucleotide[c] + 1.0 Xanthine[c] + 1.0 H2O H2O[c] => 1.0 H+[c] + 1.0 Urate C5H4N4O3[c] + 1.0 Nicotinamide adenine dinucleotide - reduced[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 1.17.1.4
  • BioCyc : META:RXN0-901
  • MetaNetX (MNX) Equation : MNXR105225
  • RHEA:
  • Reactome : REACT_R-GGA-421158
  • KEGG Reaction : R02103




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