Difference between revisions of "RXN-8642"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8642 RXN-8642] == * direction: ** REVERSIBLE * common name: ** NADP-dependent isocitrate dehydr...") |
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== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[OXALO-SUCCINATE]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[ | + | ** 1 [[OXALO-SUCCINATE]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 oxalosuccinate[c] '''+''' 1 H+[c] '''<=>''' 1 | + | ** 1 oxalosuccinate[c] '''+''' 1 H+[c] '''<=>''' 1 2-oxoglutarate[c] '''+''' 1 CO2[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| Line 46: | Line 46: | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19384 19384] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R00268 R00268] | ** [http://www.genome.jp/dbget-bin/www_bget?R00268 R00268] | ||
| Line 54: | Line 56: | ||
{{#set: in pathway=}} | {{#set: in pathway=}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 11:34, 10 January 2019
Contents
Reaction RXN-8642
- direction:
- REVERSIBLE
- common name:
- NADP-dependent isocitrate dehydrogenase
- Synonym(s):
- oxalsuccinic decarboxylase
- isocitrate (NADP) dehydrogenase
- isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase
- NADP-specific isocitrate dehydrogenase
- NADP-linked isocitrate dehydrogenase
- NADP isocitric dehydrogenase
- isocitrate dehydrogenase (NADP-dependent)
- NADP-dependent isocitric dehydrogenase
- triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase
- NADP+-linked isocitrate dehydrogenase
- IDH (ambiguous)
- dual-cofactor-specific isocitrate dehydrogenase
- NADP+-ICDH
- NADP+-IDH
- IDP
- IDP1
- IDP2
- IDP3
Reaction Formula
- With identifiers:
- 1 OXALO-SUCCINATE[c] + 1 PROTON[c] <=> 1 2-KETOGLUTARATE[c] + 1 CARBON-DIOXIDE[c]
- With common name(s):
- 1 oxalosuccinate[c] + 1 H+[c] <=> 1 2-oxoglutarate[c] + 1 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ08749
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
