Difference between revisions of "PYRROLINECARBREDUCT-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRROLINECARBREDUCT-RXN PYRROLINECARBREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** pyrroline-5-carboxylate reductase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/1.5.1.2 EC-1.5.1.2]
 
** [http://enzyme.expasy.org/EC/1.5.1.2 EC-1.5.1.2]
 +
* common name:
 +
** pyrroline-5-carboxylate reductase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[PROTON]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''=>''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[PRO]][c]
+
** 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[PRO]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 H+[c] '''+''' 1 NAD(P)H[c] '''+''' 1 (S)-1-pyrroline-5-carboxylate[c] '''=>''' 1 NAD(P)+[c] '''+''' 1 L-proline[c]
+
** 1 (S)-1-pyrroline-5-carboxylate[c] '''+''' 1 NAD(P)H[c] '''+''' 2 H+[c] '''=>''' 1 L-proline[c] '''+''' 1 NAD(P)+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ11815]]
+
* Gene: [[SJ22264]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
* Gene: [[SJ15062]]
 
* Gene: [[SJ15062]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ22264]]
+
* Gene: [[SJ11815]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY]
 
* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-6344]], L-ornithine degradation II (Stickland reaction): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344]
 
* [[PWY-6344]], L-ornithine degradation II (Stickland reaction): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344]
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''9''' reactions in the full pathway
 +
* [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-4981]], L-proline biosynthesis II (from arginine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981]
 
* [[PWY-4981]], L-proline biosynthesis II (from arginine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981]
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
 
* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14107 14107]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R01248 R01248]
 
** [http://www.genome.jp/dbget-bin/www_bget?R01248 R01248]
Line 68: Line 70:
 
** [http://www.uniprot.org/uniprot/Q04708 Q04708]
 
** [http://www.uniprot.org/uniprot/Q04708 Q04708]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=pyrroline-5-carboxylate reductase}}
 
 
{{#set: ec number=EC-1.5.1.2}}
 
{{#set: ec number=EC-1.5.1.2}}
−
{{#set: gene associated=SJ11815|SJ15062|SJ22264}}
+
{{#set: common name=pyrroline-5-carboxylate reductase}}
−
{{#set: in pathway=PROSYN-PWY|ARG-PRO-PWY|PWY-6344|PWY-4981|PWY-3341}}
+
{{#set: gene associated=SJ22264|SJ15062|SJ11815}}
 +
{{#set: in pathway=ARG-PRO-PWY|PWY-6344|PROSYN-PWY|PWY-4981|PWY-3341}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 10:40, 10 January 2019

Reaction PYRROLINECARBREDUCT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • pyrroline-5-carboxylate reductase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • ARG-PRO-PWY, L-arginine degradation VI (arginase 2 pathway): ARG-PRO-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6344, L-ornithine degradation II (Stickland reaction): PWY-6344
    • 2 reactions found over 9 reactions in the full pathway
  • PROSYN-PWY, L-proline biosynthesis I: PROSYN-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-4981, L-proline biosynthesis II (from arginine): PWY-4981
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-3341, L-proline biosynthesis III: PWY-3341
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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