Difference between revisions of "TRNA-CHARGING-PWY"
From metabolic_network
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?obje...") |
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| Line 13: | Line 13: | ||
* [[ALANINE--TRNA-LIGASE-RXN]] | * [[ALANINE--TRNA-LIGASE-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
| + | *** [[SJ05317]] | ||
*** [[SJ09204]] | *** [[SJ09204]] | ||
*** [[SJ02907]] | *** [[SJ02907]] | ||
| − | |||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[ARGININE--TRNA-LIGASE-RXN]] | * [[ARGININE--TRNA-LIGASE-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
| − | |||
*** [[SJ05085]] | *** [[SJ05085]] | ||
*** [[SJ11647]] | *** [[SJ11647]] | ||
| + | *** [[SJ13753]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[ASPARAGINE--TRNA-LIGASE-RXN]] | * [[ASPARAGINE--TRNA-LIGASE-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| − | |||
*** [[SJ20233]] | *** [[SJ20233]] | ||
| + | *** [[SJ18954]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[ASPARTATE--TRNA-LIGASE-RXN]] | * [[ASPARTATE--TRNA-LIGASE-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| Line 39: | Line 39: | ||
*** [[SJ03188]] | *** [[SJ03188]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[CYSTEINE--TRNA-LIGASE-RXN]] | * [[CYSTEINE--TRNA-LIGASE-RXN]] | ||
** 4 associated gene(s): | ** 4 associated gene(s): | ||
| Line 48: | Line 48: | ||
*** [[SJ21439]] | *** [[SJ21439]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[GLURS-RXN]] | * [[GLURS-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| − | |||
*** [[SJ12903]] | *** [[SJ12903]] | ||
| + | *** [[SJ07890]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[GLUTAMINE--TRNA-LIGASE-RXN]] | * [[GLUTAMINE--TRNA-LIGASE-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
*** [[SJ22527]] | *** [[SJ22527]] | ||
| − | |||
*** [[SJ16362]] | *** [[SJ16362]] | ||
| + | *** [[SJ21190]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| + | *** [[annotation-saccharina_japonica_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[GLYCINE--TRNA-LIGASE-RXN]] | * [[GLYCINE--TRNA-LIGASE-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
| Line 71: | Line 71: | ||
*** [[SJ16976]] | *** [[SJ16976]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| + | *** [[annotation-saccharina_japonica_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[HISTIDINE--TRNA-LIGASE-RXN]] | * [[HISTIDINE--TRNA-LIGASE-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| + | *** [[SJ21166]] | ||
*** [[SJ07221]] | *** [[SJ07221]] | ||
| − | |||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[ISOLEUCINE--TRNA-LIGASE-RXN]] | * [[ISOLEUCINE--TRNA-LIGASE-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
| − | |||
*** [[SJ03174]] | *** [[SJ03174]] | ||
| + | *** [[SJ16361]] | ||
*** [[SJ03173]] | *** [[SJ03173]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[LEUCINE--TRNA-LIGASE-RXN]] | * [[LEUCINE--TRNA-LIGASE-RXN]] | ||
** 4 associated gene(s): | ** 4 associated gene(s): | ||
| Line 95: | Line 95: | ||
*** [[SJ16362]] | *** [[SJ16362]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[LYSINE--TRNA-LIGASE-RXN]] | * [[LYSINE--TRNA-LIGASE-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
| Line 103: | Line 103: | ||
*** [[SJ21009]] | *** [[SJ21009]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[METHIONINE--TRNA-LIGASE-RXN]] | * [[METHIONINE--TRNA-LIGASE-RXN]] | ||
** 7 associated gene(s): | ** 7 associated gene(s): | ||
| − | |||
*** [[SJ10034]] | *** [[SJ10034]] | ||
*** [[SJ03581]] | *** [[SJ03581]] | ||
| Line 114: | Line 113: | ||
*** [[SJ04411]] | *** [[SJ04411]] | ||
*** [[SJ10455]] | *** [[SJ10455]] | ||
| + | *** [[SJ15542]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[PHENYLALANINE--TRNA-LIGASE-RXN]] | * [[PHENYLALANINE--TRNA-LIGASE-RXN]] | ||
** 5 associated gene(s): | ** 5 associated gene(s): | ||
| − | *** [[ | + | *** [[SJ10005]] |
*** [[SJ20825]] | *** [[SJ20825]] | ||
*** [[SJ04988]] | *** [[SJ04988]] | ||
| − | |||
*** [[SJ07745]] | *** [[SJ07745]] | ||
| + | *** [[SJ20176]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[PROLINE--TRNA-LIGASE-RXN]] | * [[PROLINE--TRNA-LIGASE-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
| Line 133: | Line 133: | ||
*** [[SJ16507]] | *** [[SJ16507]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| + | *** [[annotation-saccharina_japonica_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[RXN-16165]] | * [[RXN-16165]] | ||
** 7 associated gene(s): | ** 7 associated gene(s): | ||
*** [[SJ03581]] | *** [[SJ03581]] | ||
| − | |||
| − | |||
| − | |||
*** [[SJ21346]] | *** [[SJ21346]] | ||
*** [[SJ14459]] | *** [[SJ14459]] | ||
| + | *** [[SJ15542]] | ||
| + | *** [[SJ10034]] | ||
*** [[SJ04411]] | *** [[SJ04411]] | ||
| + | *** [[SJ10455]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[SERINE--TRNA-LIGASE-RXN]] | * [[SERINE--TRNA-LIGASE-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| Line 152: | Line 152: | ||
*** [[SJ07311]] | *** [[SJ07311]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[THREONINE--TRNA-LIGASE-RXN]] | * [[THREONINE--TRNA-LIGASE-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
| − | |||
*** [[SJ20100]] | *** [[SJ20100]] | ||
| + | *** [[SJ03199]] | ||
*** [[SJ17482]] | *** [[SJ17482]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[TRYPTOPHAN--TRNA-LIGASE-RXN]] | * [[TRYPTOPHAN--TRNA-LIGASE-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
| Line 168: | Line 168: | ||
*** [[SJ02283]] | *** [[SJ02283]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[TYROSINE--TRNA-LIGASE-RXN]] | * [[TYROSINE--TRNA-LIGASE-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
| + | *** [[SJ18555]] | ||
*** [[SJ02072]] | *** [[SJ02072]] | ||
*** [[SJ02063]] | *** [[SJ02063]] | ||
| − | |||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[VALINE--TRNA-LIGASE-RXN]] | * [[VALINE--TRNA-LIGASE-RXN]] | ||
** 8 associated gene(s): | ** 8 associated gene(s): | ||
| − | |||
| − | |||
*** [[SJ20484]] | *** [[SJ20484]] | ||
| − | *** [[ | + | *** [[SJ05104]] |
| + | *** [[SJ04395]] | ||
| + | *** [[SJ02063]] | ||
*** [[SJ02072]] | *** [[SJ02072]] | ||
| − | |||
*** [[SJ16362]] | *** [[SJ16362]] | ||
| − | *** [[ | + | *** [[SJ05105]] |
| + | *** [[SJ15367]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
== Reaction(s) not found == | == Reaction(s) not found == | ||
== External links == | == External links == | ||
Latest revision as of 10:42, 10 January 2019
Pathway TRNA-CHARGING-PWY
Reaction(s) found
21 reactions found over 21 reactions in the full pathway
- ALANINE--TRNA-LIGASE-RXN
- 3 associated gene(s):
- 2 reconstruction source(s) associated:
- ARGININE--TRNA-LIGASE-RXN
- 3 associated gene(s):
- 2 reconstruction source(s) associated:
- ASPARAGINE--TRNA-LIGASE-RXN
- 2 associated gene(s):
- 2 reconstruction source(s) associated:
- ASPARTATE--TRNA-LIGASE-RXN
- 2 associated gene(s):
- 2 reconstruction source(s) associated:
- CYSTEINE--TRNA-LIGASE-RXN
- 4 associated gene(s):
- 2 reconstruction source(s) associated:
- GLURS-RXN
- 2 associated gene(s):
- 2 reconstruction source(s) associated:
- GLUTAMINE--TRNA-LIGASE-RXN
- 3 associated gene(s):
- 2 reconstruction source(s) associated:
- GLYCINE--TRNA-LIGASE-RXN
- 3 associated gene(s):
- 2 reconstruction source(s) associated:
- HISTIDINE--TRNA-LIGASE-RXN
- 2 associated gene(s):
- 2 reconstruction source(s) associated:
- ISOLEUCINE--TRNA-LIGASE-RXN
- 3 associated gene(s):
- 2 reconstruction source(s) associated:
- LEUCINE--TRNA-LIGASE-RXN
- 4 associated gene(s):
- 2 reconstruction source(s) associated:
- LYSINE--TRNA-LIGASE-RXN
- 3 associated gene(s):
- 2 reconstruction source(s) associated:
- METHIONINE--TRNA-LIGASE-RXN
- 7 associated gene(s):
- 2 reconstruction source(s) associated:
- PHENYLALANINE--TRNA-LIGASE-RXN
- 5 associated gene(s):
- 2 reconstruction source(s) associated:
- PROLINE--TRNA-LIGASE-RXN
- 3 associated gene(s):
- 2 reconstruction source(s) associated:
- RXN-16165
- 7 associated gene(s):
- 2 reconstruction source(s) associated:
- SERINE--TRNA-LIGASE-RXN
- 2 associated gene(s):
- 2 reconstruction source(s) associated:
- THREONINE--TRNA-LIGASE-RXN
- 3 associated gene(s):
- 2 reconstruction source(s) associated:
- TRYPTOPHAN--TRNA-LIGASE-RXN
- 3 associated gene(s):
- 2 reconstruction source(s) associated:
- TYROSINE--TRNA-LIGASE-RXN
- 3 associated gene(s):
- 2 reconstruction source(s) associated:
- VALINE--TRNA-LIGASE-RXN
- 8 associated gene(s):
- 2 reconstruction source(s) associated:
Reaction(s) not found
External links
- ECOCYC:
