Difference between revisions of "RXN-13163"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13163 RXN-13163] == * direction: ** REVERSIBLE * common name: ** AT2G43090.1 * ec number: ** [h...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** REVERSIBLE | ** REVERSIBLE | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/4.2.1.33 EC-4.2.1.33] | ** [http://enzyme.expasy.org/EC/4.2.1.33 EC-4.2.1.33] | ||
| + | * common name: | ||
| + | ** AT2G43090.1 | ||
* Synonym(s): | * Synonym(s): | ||
| Line 17: | Line 17: | ||
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[SJ09771]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | + | * Gene: [[SJ22396]] | |
| − | * Gene: [[ | + | |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
== Reconstruction information == | == Reconstruction information == | ||
| Line 33: | Line 33: | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10679 10679] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R04001 R04001] | ||
{{#set: direction=REVERSIBLE}} | {{#set: direction=REVERSIBLE}} | ||
| − | |||
{{#set: ec number=EC-4.2.1.33}} | {{#set: ec number=EC-4.2.1.33}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=AT2G43090.1}} |
| + | {{#set: gene associated=SJ09771|SJ22396}} | ||
{{#set: in pathway=}} | {{#set: in pathway=}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 10:50, 10 January 2019
Contents
Reaction RXN-13163
- direction:
- REVERSIBLE
- ec number:
- common name:
- AT2G43090.1
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 (2R,3S)-3-isopropylmalate[c] <=> 1 (2S)-2-isopropylmalate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ09771
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ22396
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
