Difference between revisions of "ASPAMINOTRANS-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPAMINOTRANS-RXN ASPAMINOTRANS-RXN] == * direction: ** REVERSIBLE * common name: ** aspartate tran...")
 
 
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* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.6.1.1 EC-2.6.1.1]
 
* common name:
 
* common name:
 
** aspartate transaminase
 
** aspartate transaminase
 
** L-phenylalanine:2-oxoglutarate aminotransferase
 
** L-phenylalanine:2-oxoglutarate aminotransferase
* ec number:
 
** [http://enzyme.expasy.org/EC/2.6.1.1 EC-2.6.1.1]
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-ASPARTATE]][c] '''<=>''' 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[GLT]][c]
+
** 1 [[L-ASPARTATE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[GLT]][c]
 
* With common name(s):
 
* With common name(s):
** 1 2-oxoglutarate[c] '''+''' 1 L-aspartate[c] '''<=>''' 1 oxaloacetate[c] '''+''' 1 L-glutamate[c]
+
** 1 L-aspartate[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 oxaloacetate[c] '''+''' 1 L-glutamate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
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* Gene: [[SJ08678]]
 
* Gene: [[SJ08678]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
* Gene: [[SJ20943]]
+
* Gene: [[SJ05778]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
*** Assignment: GO-TERM
+
*** Assignment: EC-NUMBER
* Gene: [[SJ04188]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
** Source: [[annotation-saccharina_japonica_genome]]
+
*** Assignment: GO-TERM
+
 
* Gene: [[SJ07646]]
 
* Gene: [[SJ07646]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
* Gene: [[SJ05778]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ04188]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
*** Assignment: EC-NUMBER
+
*** Assignment: GO-TERM
** Source: [[orthology-ectocarpus_siliculosus]]
+
* Gene: [[SJ20943]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-5913]], partial TCA cycle (obligate autotrophs): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913]
+
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
** '''10''' reactions found over '''11''' reactions in the full pathway
+
** '''10''' reactions found over '''10''' reactions in the full pathway
* [[MALATE-ASPARTATE-SHUTTLE-PWY]], L-aspartate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=MALATE-ASPARTATE-SHUTTLE-PWY MALATE-ASPARTATE-SHUTTLE-PWY]
+
** '''2''' reactions found over '''2''' reactions in the full pathway
+
* [[PWY-7383]], anaerobic energy metabolism (invertebrates, cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7383 PWY-7383]
+
** '''5''' reactions found over '''7''' reactions in the full pathway
+
 
* [[ASPARTATE-DEG1-PWY]], L-aspartate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ASPARTATE-DEG1-PWY ASPARTATE-DEG1-PWY]
 
* [[ASPARTATE-DEG1-PWY]], L-aspartate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ASPARTATE-DEG1-PWY ASPARTATE-DEG1-PWY]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
* [[ASPARTATESYN-PWY]], L-aspartate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=ASPARTATESYN-PWY ASPARTATESYN-PWY]
 
* [[ASPARTATESYN-PWY]], L-aspartate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=ASPARTATESYN-PWY ASPARTATESYN-PWY]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
 
** '''10''' reactions found over '''10''' reactions in the full pathway
 
* [[GLUTDEG-PWY]], L-glutamate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=GLUTDEG-PWY GLUTDEG-PWY]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115]
 
* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[GLUTDEG-PWY]], L-glutamate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=GLUTDEG-PWY GLUTDEG-PWY]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5913]], partial TCA cycle (obligate autotrophs): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[ASPARAGINE-DEG1-PWY-1]], L-asparagine degradation III (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE-DEG1-PWY-1 ASPARAGINE-DEG1-PWY-1]
 
* [[ASPARAGINE-DEG1-PWY-1]], L-asparagine degradation III (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE-DEG1-PWY-1 ASPARAGINE-DEG1-PWY-1]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7383]], anaerobic energy metabolism (invertebrates, cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7383 PWY-7383]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[MALATE-ASPARTATE-SHUTTLE-PWY]], L-aspartate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=MALATE-ASPARTATE-SHUTTLE-PWY MALATE-ASPARTATE-SHUTTLE-PWY]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
*** Tool: [[pantograph]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21824 21824]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21827 21827]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00355 R00355]
 
** [http://www.genome.jp/dbget-bin/www_bget?R00355 R00355]
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** [http://www.uniprot.org/uniprot/P26563 P26563]
 
** [http://www.uniprot.org/uniprot/P26563 P26563]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
 +
{{#set: ec number=EC-2.6.1.1}}
 
{{#set: common name=aspartate transaminase}}
 
{{#set: common name=aspartate transaminase}}
 
{{#set: common name=L-phenylalanine:2-oxoglutarate aminotransferase}}
 
{{#set: common name=L-phenylalanine:2-oxoglutarate aminotransferase}}
{{#set: ec number=EC-2.6.1.1}}
+
{{#set: gene associated=SJ08678|SJ05778|SJ07646|SJ04188|SJ20943}}
{{#set: gene associated=SJ08678|SJ20943|SJ04188|SJ07646|SJ05778}}
+
{{#set: in pathway=PWY-7117|ASPARTATE-DEG1-PWY|ASPARTATESYN-PWY|PWY-7115|GLUTDEG-PWY|PWY-5913|ASPARAGINE-DEG1-PWY-1|PWY-7383|MALATE-ASPARTATE-SHUTTLE-PWY}}
{{#set: in pathway=PWY-5913|MALATE-ASPARTATE-SHUTTLE-PWY|PWY-7383|ASPARTATE-DEG1-PWY|ASPARTATESYN-PWY|PWY-7117|GLUTDEG-PWY|PWY-7115|ASPARAGINE-DEG1-PWY-1}}
+
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
+
{{#set: reconstruction source=orthology-arabidopsis_thaliana|annotation-saccharina_japonica_genome|orthology-nannochloropsis_salina|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 11:51, 10 January 2019

Reaction ASPAMINOTRANS-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • common name:
    • aspartate transaminase
    • L-phenylalanine:2-oxoglutarate aminotransferase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links