Difference between revisions of "ACYLCOASYN-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOASYN-RXN ACYLCOASYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 2,3,4-saturated f...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* common name:
 
* common name:
 
** 2,3,4-saturated fatty acyl-CoA synthetase
 
** 2,3,4-saturated fatty acyl-CoA synthetase
 
** fatty acyl-CoA synthetase
 
** fatty acyl-CoA synthetase
 
** long-chain fatty acid-CoA ligase
 
** long-chain fatty acid-CoA ligase
−
* ec number:
 
−
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
 
* Synonym(s):
 
* Synonym(s):
 
** Acyl-activating enzyme
 
** Acyl-activating enzyme
Line 15: Line 15:
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD66-39]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[CPD66-39]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a 2,3,4-saturated fatty acid[c] '''+''' 1 coenzyme A[c] '''+''' 1 ATP[c] '''=>''' 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
+
** 1 a 2,3,4-saturated fatty acid[c] '''+''' 1 coenzyme A[c] '''+''' 1 ATP[c] '''=>''' 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ03650]]
+
* Gene: [[SJ08691]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
Line 28: Line 28:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ13972]]
+
* Gene: [[SJ03650]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ08690]]
+
* Gene: [[SJ08692]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ08691]]
+
* Gene: [[SJ08690]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
* Gene: [[SJ13972]]
−
* Gene: [[SJ08692]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[PWY-5136]], fatty acid β-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
 
* [[PWY-5136]], fatty acid β-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
 
* [[PWY-7288]], fatty acid β-oxidation (peroxisome, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7288 PWY-7288]
 
* [[PWY-7288]], fatty acid β-oxidation (peroxisome, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7288 PWY-7288]
 
** '''4''' reactions found over '''5''' reactions in the full pathway
 
** '''4''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY66-391]], fatty acid β-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
 
* [[PWY66-391]], fatty acid β-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
Line 97: Line 97:
 
** [http://www.uniprot.org/uniprot/O60135 O60135]
 
** [http://www.uniprot.org/uniprot/O60135 O60135]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-6.2.1.3}}
 
{{#set: common name=2,3,4-saturated fatty acyl-CoA synthetase}}
 
{{#set: common name=2,3,4-saturated fatty acyl-CoA synthetase}}
 
{{#set: common name=fatty acyl-CoA synthetase}}
 
{{#set: common name=fatty acyl-CoA synthetase}}
 
{{#set: common name=long-chain fatty acid-CoA ligase}}
 
{{#set: common name=long-chain fatty acid-CoA ligase}}
−
{{#set: ec number=EC-6.2.1.3}}
 
 
{{#set: common name=Acyl-activating enzyme|Fatty acid thiokinase (long-chain)}}
 
{{#set: common name=Acyl-activating enzyme|Fatty acid thiokinase (long-chain)}}
−
{{#set: gene associated=SJ03650|SJ05591|SJ13972|SJ08690|SJ08691|SJ08692}}
+
{{#set: gene associated=SJ08691|SJ05591|SJ03650|SJ08692|SJ08690|SJ13972}}
−
{{#set: in pathway=PWY-5136|FAO-PWY|PWY-7288|PWY66-391}}
+
{{#set: in pathway=PWY-5136|PWY-7288|PWY66-391|FAO-PWY}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 11:15, 10 January 2019

Reaction ACYLCOASYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • 2,3,4-saturated fatty acyl-CoA synthetase
    • fatty acyl-CoA synthetase
    • long-chain fatty acid-CoA ligase
  • Synonym(s):
    • Acyl-activating enzyme
    • Fatty acid thiokinase (long-chain)

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a 2,3,4-saturated fatty acid[c] + 1 coenzyme A[c] + 1 ATP[c] => 1 a 2,3,4-saturated fatty acyl CoA[c] + 1 diphosphate[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5136, fatty acid β-oxidation II (peroxisome): PWY-5136
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7288, fatty acid β-oxidation (peroxisome, yeast): PWY-7288
    • 4 reactions found over 5 reactions in the full pathway
  • PWY66-391, fatty acid β-oxidation VI (peroxisome): PWY66-391
    • 6 reactions found over 7 reactions in the full pathway
  • FAO-PWY, fatty acid β-oxidation I: FAO-PWY
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=ACYLCOASYN-RXN&oldid=14839"