Difference between revisions of "RXN-12454"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12454 RXN-12454] == * direction: ** LEFT-TO-RIGHT * common name: ** tRNA-dihydrouridine16 synth...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/1.3.1.88 EC-1.3.1.88] | ** [http://enzyme.expasy.org/EC/1.3.1.88 EC-1.3.1.88] | ||
| + | * common name: | ||
| + | ** tRNA-dihydrouridine16 synthase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[Uracil16-in-tRNAs]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[56-Dihydrouracil16-in-tRNAs]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 a uracil16 in tRNA[c] '''+''' 1 NAD(P)H[c] '''+''' 1 H+[c] '''=>''' 1 a 5,6-dihydrouracil16 in tRNA[c] '''+''' 1 NAD(P)+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[SJ02952]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | * Gene: [[ | + | * Gene: [[SJ03254]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| Line 29: | Line 29: | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=53378 53378] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-1.3.1.88}} | {{#set: ec number=EC-1.3.1.88}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=tRNA-dihydrouridine16 synthase}} |
| + | {{#set: gene associated=SJ02952|SJ03254}} | ||
{{#set: in pathway=}} | {{#set: in pathway=}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 11:17, 10 January 2019
Contents
Reaction RXN-12454
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- tRNA-dihydrouridine16 synthase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 Uracil16-in-tRNAs[c] + 1 NADH-P-OR-NOP[c] + 1 PROTON[c] => 1 56-Dihydrouracil16-in-tRNAs[c] + 1 NAD-P-OR-NOP[c]
- With common name(s):
- 1 a uracil16 in tRNA[c] + 1 NAD(P)H[c] + 1 H+[c] => 1 a 5,6-dihydrouracil16 in tRNA[c] + 1 NAD(P)+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ02952
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ03254
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
Pathways
Reconstruction information
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- RHEA:
