Difference between revisions of "METHYLACYLYLCOA-HYDROXY-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLACYLYLCOA-HYDROXY-RXN METHYLACYLYLCOA-HYDROXY-RXN] == * direction: ** REVERSIBLE * common nam...") |
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Line 3: | Line 3: | ||
* direction: | * direction: | ||
** REVERSIBLE | ** REVERSIBLE | ||
+ | * ec number: | ||
+ | ** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17] | ||
* common name: | * common name: | ||
** Methylacrylyl-CoA hydratase | ** Methylacrylyl-CoA hydratase | ||
** 3-hydroxy-isobutyryl-CoA hydro-lyase | ** 3-hydroxy-isobutyryl-CoA hydro-lyase | ||
** enoyl-CoA hydratase | ** enoyl-CoA hydratase | ||
− | |||
− | |||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[CPD-12173]][c] '''<=>''' 1 [[ | + | ** 1 [[CPD-12173]][c] '''<=>''' 1 [[METHACRYLYL-COA]][c] '''+''' 1 [[WATER]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 (S)-3-hydroxy-isobutanoyl-CoA[c] '''<=>''' 1 | + | ** 1 (S)-3-hydroxy-isobutanoyl-CoA[c] '''<=>''' 1 methylacrylyl-CoA[c] '''+''' 1 H2O[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | |||
− | |||
* Gene: [[SJ03913]] | * Gene: [[SJ03913]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[orthology-arabidopsis_thaliana]] | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[SJ07211]] | ||
+ | ** Source: [[annotation-saccharina_japonica_genome]] | ||
+ | *** Assignment: EC-NUMBER | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
* Gene: [[SJ21390]] | * Gene: [[SJ21390]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
− | * Gene: [[ | + | * Gene: [[SJ03584]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
− | *** Assignment: | + | *** Assignment: GO-TERM |
+ | * Gene: [[SJ10275]] | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
− | |||
* Gene: [[SJ14591]] | * Gene: [[SJ14591]] | ||
− | |||
− | |||
− | |||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
== Pathways == | == Pathways == | ||
* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY] | * [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY] | ||
− | ** ''' | + | ** '''6''' reactions found over '''8''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
Line 55: | Line 55: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31178 31178] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R04224 R04224] | ** [http://www.genome.jp/dbget-bin/www_bget?R04224 R04224] | ||
Line 83: | Line 83: | ||
** [http://www.uniprot.org/uniprot/O52797 O52797] | ** [http://www.uniprot.org/uniprot/O52797 O52797] | ||
{{#set: direction=REVERSIBLE}} | {{#set: direction=REVERSIBLE}} | ||
+ | {{#set: ec number=EC-4.2.1.17}} | ||
{{#set: common name=Methylacrylyl-CoA hydratase}} | {{#set: common name=Methylacrylyl-CoA hydratase}} | ||
{{#set: common name=3-hydroxy-isobutyryl-CoA hydro-lyase}} | {{#set: common name=3-hydroxy-isobutyryl-CoA hydro-lyase}} | ||
{{#set: common name=enoyl-CoA hydratase}} | {{#set: common name=enoyl-CoA hydratase}} | ||
− | + | {{#set: gene associated=SJ03913|SJ07211|SJ21390|SJ03584|SJ10275|SJ14591}} | |
− | {{#set: gene associated= | + | |
{{#set: in pathway=VALDEG-PWY}} | {{#set: in pathway=VALDEG-PWY}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 11:18, 10 January 2019
Contents
Reaction METHYLACYLYLCOA-HYDROXY-RXN
- direction:
- REVERSIBLE
- ec number:
- common name:
- Methylacrylyl-CoA hydratase
- 3-hydroxy-isobutyryl-CoA hydro-lyase
- enoyl-CoA hydratase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPD-12173[c] <=> 1 METHACRYLYL-COA[c] + 1 WATER[c]
- With common name(s):
- 1 (S)-3-hydroxy-isobutanoyl-CoA[c] <=> 1 methylacrylyl-CoA[c] + 1 H2O[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ03913
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ07211
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ21390
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ03584
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ10275
- Source: orthology-ectocarpus_siliculosus
- Gene: SJ14591
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
Pathways
- VALDEG-PWY, L-valine degradation I: VALDEG-PWY
- 6 reactions found over 8 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: